RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 KRT6BP04259 564 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 JUNBP17275 347 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 MMP8P22894 467 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SMTNL2Q2TAL5 461 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 CCDC58Q4VC31 144 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 IRAK1BP1Q5VVH5 260 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 C9orf57Q5W0N0 161 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 CCDC81Q6ZN84 652 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 ERMP1Q7Z2K6 904 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SLC22A16Q86VW1 577 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 ARMC8Q8IUR7 673 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 NDRG1Q92597 394 aaKnown RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 TMEM176AQ96HP8 235 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 NPAS2Q99743 824 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 ILKAPQ9H0C8 392 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-203ENST00000375315 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 COX16Q9P0S2 106 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 PCSK1NQ9UHG2 260 aa12.2□□□□□ -0.46
C9orf3-203ENST00000375315 RANBP2P49792 3224 aaKnown RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 A0A1W2PQ45 241 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 A0A1W2PQY0 241 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 TAF4O00268 1085 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CLDN5O00501 218 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 UGT2B4P06133 528 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 MBL2P11226 248 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 KDELR1P24390 212 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CLCNKBP51801 687 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 OGDHQ02218 1023 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 PPP1R26Q5T8A7 1209 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 SEL1L3Q68CR1 1132 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 NXNQ6DKJ4 435 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 ZNF773Q6PK81 442 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 KIAA0408Q6ZU52 694 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 FAM20CQ8IXL6 584 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 WDTC1Q8N5D0 677 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 TMEM35BQ8NCS4 154 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CXorf38Q8TB03 319 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 SNX19Q92543 992 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 PGBD4Q96DM1 585 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 C9orf16Q9BUW7 83 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 B3GNT5Q9BYG0 378 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 TRIT1Q9H3H1 467 aaKnown RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 PLAC1Q9HBJ0 212 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 ZBTB26Q9HCK0 441 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CEP290O15078 2479 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 MGAMO43451 1857 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 KPNA7A9QM74 516 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 AURKAO14965 403 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 SNPHO15079 494 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 HDAC3O15379 428 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 SCO2O43819 266 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 B3GAT3O94766 335 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 ALX3O95076 343 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 ALDOAP04075 364 aaKnown RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 C7P10643 843 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 PSMD8P48556 350 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CLK3P49761 638 aaKnown RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 GNG2P59768 71 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 TAF5Q15542 800 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 KCNT1Q5JUK3 1230 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 FBXO47Q5MNV8 452 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CCNYL2Q5T2Q4 361 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 OR6B2Q6IFH4 312 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CYP2R1Q6VVX0 501 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 DHRSXQ8N5I4 330 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CDKL2Q92772 493 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 CPXM1Q96SM3 734 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 OR2B2Q9GZK3 357 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 ATP13A3Q9H7F0 1226 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 C8orf4Q9NR00 106 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 TMEM216Q9P0N5 145 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 FBXO9Q9UK97 447 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 TSPAN16Q9UKR8 245 aa12.19□□□□□ -0.46
C9orf3-203ENST00000375315 PRG3Q9Y2Y8 225 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-203ENST00000375315 H7C0C1 242 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 PTGESO14684 152 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 DYRK3O43781 588 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 MICAL2O94851 1124 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 FYNP06241 537 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 IFNA8P32881 189 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 PBX3P40426 434 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 BRCC3P46736 316 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 ATP5OP48047 213 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 COPZ1P61923 177 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 LRIT3Q3SXY7 679 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 PTPN20Q4JDL3 420 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 BROXQ5VW32 411 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 WSCD1Q658N2 575 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 NEK10Q6ZWH5 1172 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 CTU1Q7Z7A3 348 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 CAND1Q86VP6 1230 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 KLHDC9Q8NEP7 349 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 EBNA1BP2Q99848 306 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms