RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TCEAL6Q6IPX3 200 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 ALG9Q9H6U8 611 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 ABCG2Q9UNQ0 655 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 PIGNO95427 931 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 PDK4Q16654 411 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 SLC5A9Q2M3M2 681 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 MTX3Q5HYI7 312 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 LPCAT1Q8NF37 534 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 MROH8Q9H579 483 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 POPDC2Q9HBU9 364 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 INTS10Q9NVR2 710 aaKnown RBP8.4□□□□□ -1.07
HSPG2-203ENST00000374695 AP4B1Q9Y6B7 739 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 A0A0A0MRY4 1105 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ANPEPP15144 967 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 RNF19BQ6ZMZ0 732 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 SPATA13Q96N96 652 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TRMOQ9BU70 441 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 MND1Q9BWT6 205 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 SCN2AQ99250 2005 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PRH1P02810 166 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 FDPSP14324 419 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ZNF548Q8NEK5 533 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 OR4A15Q8NGL6 344 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 GPER1Q99527 375 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 C3orf14Q9HBI5 128 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TRIM17Q9Y577 477 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 NWD1Q149M9 1564 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 GJB7Q6PEY0 223 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 DEF8Q6ZN54 512 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TRAPPC5Q8IUR0 188 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ATP13A3Q9H7F0 1226 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ATP13A1Q9HD20 1204 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TRPM6Q9BX84 2022 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 KPNA3O00505 521 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 C9P02748 559 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 SUPT20HL2P0C7V6 817 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ARF3P61204 181 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ARF1P84077 181 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 NKX1-1Q15270 411 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ATXN7L2Q5T6C5 722 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TTI2Q6NXR4 508 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 AMIGO1Q86WK6 493 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 NXF3Q9H4D5 531 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TP53BP1Q12888 1972 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PEPDP12955 493 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PCID2Q5JVF3 399 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 RTL4Q6ZR62 310 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 SLC30A8Q8IWU4 369 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 C12orf56Q8IXR9 622 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 MRPS33Q9Y291 106 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PAPSS2O95340 614 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TGFB3P10600 412 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 GCNT1Q02742 428 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 BMPR2Q13873 1038 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.39□□□□□ -1.073e-7■■□□□ 12
HSPG2-203ENST00000374695 TMEM86AQ8N2M4 240 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PCSK9Q8NBP7 692 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TSEN15Q8WW01 171 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 KBTBD4Q9NVX7 518 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 CLIC5Q9NZA1 410 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 IGKV5-2P06315 115 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ADAM8P78325 824 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TMEM44Q2T9K0 475 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 FAM131BQ86XD5 332 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 HEXDCQ8WVB3 486 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 CRAMP1Q96RY5 1269 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 C2orf49Q9BVC5 232 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TAS2R1Q9NYW7 299 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 MICAL2O94851 1124 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ATF4P18848 351 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 RPS12P25398 132 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 CDH5P33151 784 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 AMHR2Q16671 573 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 C4orf46Q504U0 113 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 FRMD7Q6ZUT3 714 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ZNF571Q7Z3V5 609 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 IL1RAPQ9NPH3 570 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 MBD5Q9P267 1494 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 RPTORQ8N122 1335 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 THOP1P52888 689 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 OR2T34Q8NGX1 318 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 OR2T3Q8NH03 318 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 FRMPD4Q14CM0 1322 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 FAM172BPA6NC97 362 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 CTSKP43235 329 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 GTF2A2P52657 109 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TRIM28Q13263 835 aaKnown RBP8.39□□□□□ -1.07
HSPG2-203ENST00000374695 E2F2Q14209 437 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 SVOPLQ8N434 492 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 PLEKHA1Q9HB21 404 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 CRB1P82279 1406 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TSPAN4O14817 238 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 NUAK1O60285 661 aa8.39□□□□□ -1.07
HSPG2-203ENST00000374695 TBC1D25Q3MII6 688 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms