RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RBM20Q5T481 1227 aaKnown RBP13.99□□□□□ -0.17
HMGCL-203ENST00000374490 FAM43BQ6ZT52 329 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-203ENST00000374490 CUZD1Q86UP6 607 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 SEPT8Q92599 483 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 L3HYPDHQ96EM0 354 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 UBXN10Q96LJ8 280 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 PPP1R36Q96LQ0 422 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 TUBGCP5Q96RT8 1024 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 OLFM1Q99784 485 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-203ENST00000374490 RETREG1Q9H6L5 497 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 SUCOQ9UBS9 1254 aaKnown RBP13.99□□□□□ -0.17
HMGCL-203ENST00000374490 RAB26Q9ULW5 256 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 SHROOM3Q8TF72 1996 aa13.99□□□□□ -0.17
HMGCL-203ENST00000374490 TCAF2A6NFQ2 919 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 DRGXA6NNA5 263 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 UBDO15205 165 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 DENRO43583 198 aaKnown RBP13.98□□□□□ -0.17
HMGCL-203ENST00000374490 RNASEH1O60930 286 aaKnown RBP13.98□□□□□ -0.17
HMGCL-203ENST00000374490 RTN3O95197 1032 aaPredicted RBP13.98□□□□□ -0.17
HMGCL-203ENST00000374490 WISP3O95389 354 aaPredicted RBP13.98□□□□□ -0.17
HMGCL-203ENST00000374490 FGF1P05230 155 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 ITGB1P05556 798 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 CCDC166P0CW27 439 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 IMPDH1P20839 514 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 ACVR1Q04771 509 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 TMEM198Q66K66 360 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 HACD2Q6Y1H2 254 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 EFCAB3Q8N7B9 438 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 OR13J1Q8NGT2 312 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 GPR150Q8NGU9 434 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 LINC01599Q8WXQ3 324 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 SGF29Q96ES7 293 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 FEM1CQ96JP0 617 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 ATXN3LQ9H3M9 355 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 SARDHQ9UL12 918 aa13.98□□□□□ -0.17
HMGCL-203ENST00000374490 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 LOC285095A0A1B0GVY8 99 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 FAM92AA1XBS5 289 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 OR6C75A6NL08 312 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 CFLARO15519 480 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 RAMP2O60895 175 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 GPC4O75487 556 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 EPOP01588 193 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 MMP2P08253 660 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 XRCC1P18887 633 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 OGNP20774 298 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PBX3P40426 434 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PGFP49763 221 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 FAM189BP81408 668 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 TRAP1Q12931 704 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 CEACAM7Q14002 265 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PTK2BQ14289 1009 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 NOMO2Q5JPE7 1267 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 MRNIPQ6NTE8 343 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 RAB44Q7Z6P3 723 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 RTN4RL1Q86UN2 441 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 MARVELD2Q8N4S9 558 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SPPL2BQ8TCT7 592 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PABPC5Q96DU9 382 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 DCUN1D1Q96GG9 259 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 ZNF599Q96NL3 588 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 FAM193BQ96PV7 902 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 NDNQ99608 321 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SLC25A23Q9BV35 468 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 TMEM161AQ9NX61 479 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 GMIPQ9P107 970 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PLXNA3P51805 1871 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 A0A0C4DFX4 3053 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PRSS51A0A1B0GVH4 220 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PSMD12O00232 456 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 NBNO60934 754 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 S1PR4O95977 384 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 TIMP1P01033 207 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 CAPNS1P04632 268 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 JUNP05412 331 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 OR4Q2P0C623 313 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 FDXRP22570 491 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 YWHAQP27348 245 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PEX19P40855 299 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 CHN2P52757 468 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PSME3P61289 254 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 NAA20P61599 178 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 DSC2Q02487 901 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 RING1Q06587 406 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SLC10A7Q0GE19 358 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 FASTKQ14296 549 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 PDK3Q15120 406 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 LRRC36Q1X8D7 754 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SIRPB2Q5JXA9 342 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 IRAK1BP1Q5VVH5 260 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 KDELC2Q7Z4H8 507 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms