RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 F8W8V4 182 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 SLCO1B7G3V0H7 640 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 NEMP1O14524 444 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 SLC7A4O43246 635 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 PRAMEF11O60813 436 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 EFEMP2O95967 443 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 ZDHHC11BP0C7U3 371 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 CPOXP36551 454 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 CCR10P46092 362 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 SLC11A2P49281 568 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 TNK2Q07912 1038 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 DLG1Q12959 904 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 ZRSR2Q15696 482 aaKnown RBP12.14□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF789Q5FWF6 425 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 RBM20Q5T481 1227 aaKnown RBP12.14□□□□□ -0.47
HMGCL-202ENST00000374487 AGAP9Q5VTM2 703 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 IL31Q6EBC2 164 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 ACAD11Q709F0 780 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 CILP2Q8IUL8 1156 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 BBS5Q8N3I7 341 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 PHTF2Q8N3S3 785 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 MRPL43Q8N983 215 aaKnown RBP12.14□□□□□ -0.47
HMGCL-202ENST00000374487 DTX3LQ8TDB6 740 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 MYEOVQ96EZ4 313 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 WDR55Q9H6Y2 383 aaPredicted RBP12.14□□□□□ -0.47
HMGCL-202ENST00000374487 GPAMQ9HCL2 828 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 VTI1BQ9UEU0 232 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 SLC7A8Q9UHI5 535 aa12.14□□□□□ -0.47
HMGCL-202ENST00000374487 LOC285095A0A1B0GVY8 99 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 MROH6A6NGR9 719 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 CCL22O00626 93 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 TBX10O75333 385 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ATF6P18850 670 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 EPHA3P29320 983 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ELF1P32519 619 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 TUFMP49411 452 aaKnown RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 SLC34A1Q06495 639 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 IHHQ14623 411 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 MUM1Q2TAK8 710 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 KIAA1841Q6NSI8 718 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 BLOC1S5Q8TDH9 187 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ZNF570Q96NI8 536 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 SPON2Q9BUD6 331 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 NUF2Q9BZD4 464 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 LMAN2LQ9H0V9 348 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ZDHHC2Q9UIJ5 367 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 PLXNA3P51805 1871 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ACSL4O60488 711 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 GJB3O75712 270 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 SERPINF2P08697 491 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 CCDC166P0CW27 439 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ATP5F1P24539 256 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 OR1D2P34982 312 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 CLNS1AP54105 237 aaKnown RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 UBE3AQ05086 875 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 NXNQ6DKJ4 435 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 PIWIL4Q7Z3Z4 852 aaKnown RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 LDB1Q86U70 411 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 RNF168Q8IYW5 571 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 TADA1Q96BN2 335 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 OLFM1Q99784 485 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 MFSD1Q9H3U5 465 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 POMKQ9H5K3 350 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 STX18Q9P2W9 335 aaKnown RBP12.13□□□□□ -0.47
HMGCL-202ENST00000374487 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 LZTS1Q9Y250 596 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 VWA7Q9Y334 891 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 LRRC42Q9Y546 428 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
HMGCL-202ENST00000374487 A0A088AWK7 358 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ADAM12O43184 909 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 LDB2O43679 373 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ZBTB14O43829 449 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 LILRB3O75022 631 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CNPP09543 421 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 LTA4HP09960 611 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ATXN1LP0C7T5 689 aaKnown RBP12.12□□□□□ -0.47
HMGCL-202ENST00000374487 CTSAP10619 480 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 COX4I1P13073 169 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 HLA-DPA1P20036 260 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 GLDCP23378 1020 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 SERPINB5P36952 375 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 VHLP40337 213 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ERFP50548 548 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ARSDP51689 593 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 ACTR3P61158 418 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 GNA12Q03113 381 aa12.12□□□□□ -0.47
HMGCL-202ENST00000374487 KLF10Q13118 480 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms