RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CBR4Q8N4T8 237 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 TMPRSS4Q9NRS4 437 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 CDH5P33151 784 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-202ENST00000373779 SP2Q02086 613 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 KIAA0408Q6ZU52 694 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 HEXDCQ8WVB3 486 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ZC4H2Q9NQZ6 224 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 OXSMQ9NWU1 459 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ARL15Q9NXU5 204 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 H3BMM5 538 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 FFAR3O14843 346 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 GPR42O15529 346 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 OAS1P00973 400 aaKnown RBP17.45■□□□□ 0.38
PTPRU-202ENST00000373779 CKMP06732 381 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 C9orf131Q5VYM1 1079 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 SLC9A4Q6AI14 798 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 SYT12Q8IV01 421 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 DENND1AQ8TEH3 1009 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 MUC13Q9H3R2 512 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 CNTN6Q9UQ52 1028 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 MSI1O43347 362 aaKnown RBP17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ASRGL1Q7L266 308 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 COQ10BQ9H8M1 238 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ZFP14Q9HCL3 533 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 KLHL3Q9UH77 587 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 SNTNA6NMZ2 147 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 HOXA2O43364 376 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 OTCP00480 354 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ALOX15P16050 662 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 LMO2P25791 158 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ABL2P42684 1182 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 NDUFV1P49821 464 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 BOP1Q14137 746 aaKnown RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ZNF284Q2VY69 593 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 PRAMEF19Q5SWL8 479 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 TIFABQ6ZNK6 161 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 C16orf59Q7L2K0 433 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 DENND6AQ8IWF6 608 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 SELENOMQ8WWX9 145 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 CEP44Q9C0F1 390 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 NOL6Q9H6R4 1146 aaKnown RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 MMP3P08254 477 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 OR56A5P0C7T3 313 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ALOX12P18054 663 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 JAK1P23458 1154 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 HERC3Q15034 1050 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 PCSK9Q8NBP7 692 aaKnown RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ROPN1LQ96C74 230 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 LINGO1Q96FE5 620 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 RERGLQ9H628 205 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 AGO3Q9H9G7 860 aaKnown RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 PIDD1Q9HB75 910 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 BPIFA1Q9NP55 256 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 FAM149AA5PLN7 773 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 C22orf31O95567 290 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 THOP1P52888 689 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 SOWAHAQ2M3V2 549 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 PERM1Q5SV97 790 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 MBLAC2Q68D91 279 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 FAM117BQ6P1L5 589 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 FRMD7Q6ZUT3 714 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 TAS1R3Q7RTX0 852 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 MRPS31Q92665 395 aaKnown RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 C12orf42Q96LP6 360 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 FAM210AQ96ND0 272 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 LPIN3Q9BQK8 851 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 EPB41L4BQ9H329 900 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 CACNA2D2Q9NY47 1150 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 GMPPBQ9Y5P6 360 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 CHD4Q14839 1912 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ULK1O75385 1050 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 PBLDP30039 288 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 C1DQ13901 141 aaKnown RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 INO80DQ53TQ3 878 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-202ENST00000373779 ARMC4Q5T2S8 1044 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 MCOLN3Q8TDD5 553 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 MED8Q96G25 268 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 GNPTGQ9UJJ9 305 aa17.44■□□□□ 0.38
PTPRU-202ENST00000373779 SLC28A1O00337 649 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 MT-CYBP00156 380 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 RPL26P61254 145 aaKnown RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 BCL2L1Q07817 233 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PLCL1Q15111 1095 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 ZNF605Q86T29 641 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 ADAMTSL2Q86TH1 951 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 TMEM110Q86TL2 294 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PDSS2Q86YH6 399 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 OR52B2Q96RD2 323 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 SLC9A7Q96T83 725 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 REXO4Q9GZR2 422 aaKnown RBP17.43■□□□□ 0.38
PTPRU-202ENST00000373779 GIMAP4Q9NUV9 329 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PNMA8CA0A1B0GUJ8 204 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PPM1LQ5SGD2 360 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PAOXQ6QHF9 649 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 HEATR4Q86WZ0 1026 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 TEKT5Q96M29 485 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 PEBP4Q96S96 227 aa17.43■□□□□ 0.38
PTPRU-202ENST00000373779 TMEM245Q9H330 911 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms