RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NDST2P52849 883 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 TGIF1Q15583 401 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 MYLK3Q32MK0 819 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 LEKR1Q6ZMV7 388 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 CYP4V2Q6ZWL3 525 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 SDR16C5Q8N3Y7 309 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 NIPA2Q8N8Q9 360 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 OR6C4Q8NGE1 309 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 ZNF564Q8TBZ8 553 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 CXorf40AQ8TE69 158 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 CASKIN2Q8WXE0 1202 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 CCDC74AQ96AQ1 378 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 KLHL32Q96NJ5 620 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 FOXP3Q9BZS1 431 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 ZWILCHQ9H900 591 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 MBNL1Q9NR56 388 aaKnown RBP19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 SEPT10Q9P0V9 454 aa19.33■□□□□ 0.68
TRAPPC3-204ENST00000373166 TMEM110-MUSTN1A8MSY1 372 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 H3BRJ5 948 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 MYO1FO00160 1098 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 TERTO14746 1132 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 TMCC1O94876 653 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 RPLP0P05388 317 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 CELA2BP08218 269 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 LIPCP11150 499 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 ARL4AP40617 200 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 PEX5P50542 639 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 HK3P52790 923 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 CCL7P80098 99 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 SERINC3Q13530 473 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 SMTNL2Q2TAL5 461 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 BOLA3Q53S33 107 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 GDPD4Q6W3E5 623 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 KYQ8NBH2 561 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 PCDH19Q8TAB3 1148 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 HSPH1Q92598 858 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 BTBD6Q96KE9 485 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 CPEB1Q9BZB8 566 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 CTTNBP2NLQ9P2B4 639 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 UVRAGQ9P2Y5 699 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 RABGEF1Q9UJ41 708 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 GPR34Q9UPC5 381 aa19.32■□□□□ 0.68
TRAPPC3-204ENST00000373166 ARHGAP42A6NI28 874 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 AKR1B15C9JRZ8 316 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 IGSF6O95976 241 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 H2AFZP0C0S5 128 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 HGFP14210 728 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 IL1R2P27930 398 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 CCKBRP32239 447 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 SSR1P43307 286 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 HCAR3P49019 387 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 RHOAP61586 193 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 DPYSL2Q16555 572 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 INO80DQ53TQ3 878 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 MANEAQ5SRI9 462 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 H2AFVQ71UI9 128 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 GKN2Q86XP6 184 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 HID1Q8IV36 788 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 ZSCAN1Q8NBB4 408 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 TP53I13Q8NBR0 393 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 TEKT4Q8WW24 435 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 CELF6Q96J87 481 aaKnown RBP19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 CCDC42Q96M95 316 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 GDAP1L1Q96MZ0 367 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 LRRC19Q9H756 370 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 PISDQ9UG56 409 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 LCMT1Q9UIC8 334 aa19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 UBR5O95071 2799 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-204ENST00000373166 A0A1W2PQM1 296 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 SUV39H1O43463 412 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 RASGRP1O95267 797 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 FAM87AP0C7U9 286 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 TCF4P15884 667 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 ERCC2P18074 760 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 ITGB6P18564 788 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 HTR1BP28222 390 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 RAD51Q06609 339 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 DPYSQ14117 519 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 HADHQ16836 314 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 ASTE1Q2TB18 679 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 LRRC73Q5JTD7 316 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 TSACCQ96A04 125 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 TMEM159Q96B96 161 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 SEMA3CQ99985 751 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 WRAP53Q9BUR4 548 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 KLC2Q9H0B6 622 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 LRRN3Q9H3W5 708 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 CWC15Q9P013 229 aaKnown RBP19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 UBA2Q9UBT2 640 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 LOXL2Q9Y4K0 774 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 PCDHB11Q9Y5F2 797 aa19.3■□□□□ 0.68
TRAPPC3-204ENST00000373166 TMEM253P0C7T8 217 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 RARAP10276 462 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 NFKB2Q00653 900 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 SLC25A11Q02978 314 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 SRSF6Q13247 344 aaKnown RBP19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 LRRC14Q15048 493 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 IRF4Q15306 451 aa19.29■□□□□ 0.68
TRAPPC3-204ENST00000373166 TCEA2Q15560 299 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms