RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 DRC3Q9H069 523 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ASAH2Q9NR71 780 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 SUCOQ9UBS9 1254 aaKnown RBP11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF510Q9Y2H8 683 aa11.53□□□□□ -0.56
TSPAN1-201ENST00000372003 DYTNA2CJ06 578 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 HHLA1C9JL84 531 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 E9PBE3 544 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 TRIM38O00635 465 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 ACOT8O14734 319 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 MBTPS2O43462 519 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 H6PDO95479 791 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 TOP3BO95985 862 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 LCP1P13796 627 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 HMGA1P17096 107 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC5A2P31639 672 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 ACADVLP49748 655 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 RPL14P50914 215 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 THOP1P52888 689 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 NUP107P57740 925 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 TRAP1Q12931 704 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 LEXMQ3ZCV2 418 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PKDCCQ504Y2 493 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 VWA5B1Q5TIE3 1220 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 SEL1L3Q68CR1 1132 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PMF1Q6P1K2 205 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 SCYL2Q6P3W7 929 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PDZD4Q76G19 769 aaPredicted RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 SNX32Q86XE0 403 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 BBS5Q8N3I7 341 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC35F5Q8WV83 523 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 CDRT15Q96T59 188 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 LRRC40Q9H9A6 602 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PLGRKTQ9HBL7 147 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 MRM3Q9HC36 420 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 ZNF334Q9HCZ1 680 aaPredicted RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 VPS45Q9NRW7 570 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PNPLA3Q9NST1 481 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 OXSMQ9NWU1 459 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 NSMCE4AQ9NXX6 385 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 IGSF9Q9P2J2 1179 aa11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PTBP2Q9UKA9 531 aaKnown RBP11.52□□□□□ -0.57
TSPAN1-201ENST00000372003 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 A0A1W2PRU2 124 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 MAGEB16A2A368 324 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 AP3B1O00203 1094 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 TNFRSF10BO14763 440 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 AIM2O14862 343 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 KLHL41O60662 606 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 BMP10O95393 424 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 MGAT1P26572 445 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 GABRR2P28476 465 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 CCR2P41597 374 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 MTHFRP42898 656 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 POLD2P49005 469 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 MRPS22P82650 360 aaKnown RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 SMAD4Q13485 552 aaKnown RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 ART3Q13508 389 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 SPIDRQ14159 915 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 CBX2Q14781 532 aaPredicted RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 MAPRE2Q15555 327 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 CA9Q16790 459 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 CDO1Q16878 200 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 PTCRAQ6ISU1 281 aaPredicted RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 CASC4Q6P4E1 433 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 ZYG11AQ6WRX3 759 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 BHLHE22Q8NFJ8 381 aaPredicted RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 TSPAN14Q8NG11 270 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 FNDC8Q8TC99 324 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 ING5Q8WYH8 240 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 ASB9Q96DX5 294 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 TCEAL4Q96EI5 215 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 PKP2Q99959 881 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 NUF2Q9BZD4 464 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 ATXN3LQ9H3M9 355 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 POMKQ9H5K3 350 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 WDR41Q9HAD4 459 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 LRRC4Q9HBW1 653 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 ZBTB26Q9HCK0 441 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 WDR6Q9NNW5 1121 aaKnown RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 IPO11Q9UI26 975 aaKnown RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 MRPS23Q9Y3D9 190 aaKnown RBP11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 XIRP2A4UGR9 3374 aa11.51□□□□□ -0.57
TSPAN1-201ENST00000372003 TRIM64CA6NLI5 447 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 ERI2A8K979 691 aaKnown RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 NRG2O14511 850 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 COQ9O75208 318 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 POU2F2P09086 479 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 USP17L7P0C7H9 530 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 COL6A2P12110 1019 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 ZNF26P17031 533 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 XRCC1P18887 633 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 FSHRP23945 695 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 YWHAQP27348 245 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 SERPINB5P36952 375 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 GRIA1P42261 906 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 CSRP3P50461 194 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms