RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CRCPO75575 148 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 SLC11A2P49281 568 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ZNF177Q13360 481 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 TRMT5Q32P41 509 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MFSD4BQ5TF39 518 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MSANTD2Q6P1R3 559 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 CYP2R1Q6VVX0 501 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 CUZD1Q86UP6 607 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 DSELQ8IZU8 1212 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 PTGR2Q8N8N7 351 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 NSMCE3Q96MG7 304 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MRPL57Q9BQC6 102 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 GMPR2Q9P2T1 348 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 FAM8A1Q9UBU6 413 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MID2Q9UJV3 735 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 CHD7Q9P2D1 2997 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 SYN3O14994 580 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 LDB2O43679 373 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MAGEC1O60732 1142 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 SRP72O76094 671 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 RTN3O95197 1032 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 S1PR4O95977 384 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MBL2P11226 248 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 CHRM3P20309 590 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ATP5F1P24539 256 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 PEX2P28328 305 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 NDST2P52849 883 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 THOP1P52888 689 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 TXNDC8Q6A555 127 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 GALNT4Q8N4A0 578 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ENDOVQ8N8Q3 282 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 PTERQ96BW5 349 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 CCDC97Q96F63 343 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ZNF333Q96JL9 665 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 C1orf74Q96LT6 269 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 SMG9Q9H0W8 520 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 PIF1Q9H611 641 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 GALPQ9UBC7 116 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 VPS28Q9UK41 221 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ANKRD6Q9Y2G4 727 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 PCDHB9Q9Y5E1 797 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 GOLGA4Q13439 2230 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 OR6C75A6NL08 312 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 ACSL4O60488 711 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 NDUFS3O75489 264 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 IPO13O94829 963 aaKnown RBP11.77□□□□□ -0.52
PDE6C-201ENST00000371447 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.52
PDE6C-201ENST00000371447 MZF1P28698 734 aaPredicted RBP11.77□□□□□ -0.52
PDE6C-201ENST00000371447 POU4F1Q01851 419 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 LRRC73Q5JTD7 316 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 ARTNQ5T4W7 220 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 TMCO4Q5TGY1 634 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 NET1Q7Z628 596 aaPredicted RBP11.77□□□□□ -0.52
PDE6C-201ENST00000371447 SPPL2BQ8TCT7 592 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.52
PDE6C-201ENST00000371447 PRKD2Q9BZL6 878 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 PCDHAC1Q9H158 963 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 MID1IP1Q9NPA3 183 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 ANGPTL2Q9UKU9 493 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.52
PDE6C-201ENST00000371447 C1RP00736 705 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 APOA4P06727 396 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 ALPIP09923 528 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 ATXN1LP0C7T5 689 aaKnown RBP11.77□□□□□ -0.53
PDE6C-201ENST00000371447 CES1P23141 567 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 HOXC13P31276 330 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 SMAD3P84022 425 aaKnown RBP11.77□□□□□ -0.53
PDE6C-201ENST00000371447 BTKQ06187 659 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 PTPRNQ16849 979 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 HECTD3Q5T447 861 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 MYLK4Q86YV6 388 aaPredicted RBP11.77□□□□□ -0.53
PDE6C-201ENST00000371447 ARL14EPQ8N8R7 260 aaPredicted RBP11.77□□□□□ -0.53
PDE6C-201ENST00000371447 KDM1BQ8NB78 822 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 KYQ8NBH2 561 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 CALML6Q8TD86 181 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 RPL10LQ96L21 214 aaKnown RBP11.77□□□□□ -0.53
PDE6C-201ENST00000371447 FKBPLQ9UIM3 349 aa11.77□□□□□ -0.53
PDE6C-201ENST00000371447 CCDC189A1A4V9 331 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 TMEM114B3SHH9 223 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 H3BMM5 538 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 LINC00032P0C843 101 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 ATP6V1C1P21283 382 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CST5P28325 142 aaPredicted RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 SULT2A1Q06520 285 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 BFSP2Q13515 415 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CCNIQ14094 377 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 FLOT2Q14254 428 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 FAM26DQ5JW98 314 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 ZNF549Q6P9A3 640 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 IFNEQ86WN2 208 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms