RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SARDHQ9UL12 918 aa15.1■□□□□ 0.01
LMO4-201ENST00000370542 VANGL2Q9ULK5 521 aa15.1■□□□□ 0.01
LMO4-201ENST00000370542 SNX24Q9Y343 169 aa15.1■□□□□ 0.01
LMO4-201ENST00000370542 GOLGA4Q13439 2230 aaKnown RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 TP53BP1Q12888 1972 aaPredicted RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 DOCK4Q8N1I0 1966 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 TCP11X1B4DZS4 312 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 WNT9AO14904 365 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 PLRG1O43660 514 aaKnown RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 F9P00740 461 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 TFE3P19532 575 aaPredicted RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 CD38P28907 300 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 NUDT1P36639 197 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 RXRGP48443 463 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 PSMD8P48556 350 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 IFI35P80217 286 aaPredicted RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 IL9RQ01113 521 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 ZNF177Q13360 481 aaPredicted RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 SLC25A52Q3SY17 297 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 RGS9BPQ6ZS82 235 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 XYLT1Q86Y38 959 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMO4-201ENST00000370542 FBXO25Q8TCJ0 367 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 ZNF398Q8TD17 642 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 GANCQ8TET4 914 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 ARHGEF2Q92974 986 aaKnown RBP15.09■□□□□ 0.01
LMO4-201ENST00000370542 RNF34Q969K3 372 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 SKA1Q96BD8 255 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 CRELD1Q96HD1 420 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 TSC22D3Q99576 134 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 OSBPL1AQ9BXW6 950 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 WDCPQ9H6R7 721 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 ERVMER34-1Q9H9K5 563 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMO4-201ENST00000370542 SENP1Q9P0U3 644 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 ZNF212Q9UDV6 495 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 USH1CQ9Y6N9 552 aa15.09■□□□□ 0.01
LMO4-201ENST00000370542 SYNJ2BP-COX16A0A087WUM0 186 aa15.08■□□□□ 0
LMO4-201ENST00000370542 FAM47DPA6NHR8 397 aa15.08■□□□□ 0
LMO4-201ENST00000370542 ATXN7O15265 892 aaPredicted RBP15.08■□□□□ 0
LMO4-201ENST00000370542 ABCB7O75027 752 aa15.08■□□□□ 0
LMO4-201ENST00000370542 CNTN5O94779 1100 aa15.08■□□□□ 0
LMO4-201ENST00000370542 ENDOD1O94919 500 aa15.08■□□□□ 0
LMO4-201ENST00000370542 LSM8O95777 96 aaKnown RBP15.08■□□□□ 0
LMO4-201ENST00000370542 IL1BP01584 269 aa15.08■□□□□ 0
LMO4-201ENST00000370542 KRT16P08779 473 aa15.08■□□□□ 0
LMO4-201ENST00000370542 GNAZP19086 355 aa15.08■□□□□ 0
LMO4-201ENST00000370542 STX2P32856 288 aa15.08■□□□□ 0
LMO4-201ENST00000370542 METAP1P53582 386 aa15.08■□□□□ 0
LMO4-201ENST00000370542 NME3Q13232 169 aa15.08■□□□□ 0
LMO4-201ENST00000370542 DYNC1I2Q13409 638 aaKnown RBP15.08■□□□□ 0
LMO4-201ENST00000370542 STAT4Q14765 748 aa15.08■□□□□ 0
LMO4-201ENST00000370542 DLG2Q15700 870 aa15.08■□□□□ 0
LMO4-201ENST00000370542 SMAD1Q15797 465 aaKnown RBP15.08■□□□□ 0
LMO4-201ENST00000370542 AGBL4Q5VU57 503 aa15.08■□□□□ 0
LMO4-201ENST00000370542 FAM46CQ5VWP2 391 aa15.08■□□□□ 0
LMO4-201ENST00000370542 DSG4Q86SJ6 1040 aa15.08■□□□□ 0
LMO4-201ENST00000370542 SETD3Q86TU7 594 aaPredicted RBP15.08■□□□□ 0
LMO4-201ENST00000370542 EXOC3L1Q86VI1 746 aa15.08■□□□□ 0
LMO4-201ENST00000370542 IQCHQ86VS3 1027 aa15.08■□□□□ 0
LMO4-201ENST00000370542 TRIM69Q86WT6 500 aa15.08■□□□□ 0
LMO4-201ENST00000370542 OR14C36Q8NHC7 312 aa15.08■□□□□ 0
LMO4-201ENST00000370542 SAP25Q8TEE9 199 aa15.08■□□□□ 0
LMO4-201ENST00000370542 OR8D1Q8WZ84 308 aa15.08■□□□□ 0
LMO4-201ENST00000370542 C18orf8Q96DM3 657 aa15.08■□□□□ 0
LMO4-201ENST00000370542 FAM210AQ96ND0 272 aa15.08■□□□□ 0
LMO4-201ENST00000370542 TRAPPC9Q96Q05 1148 aa15.08■□□□□ 0
LMO4-201ENST00000370542 TRIM31Q9BZY9 425 aa15.08■□□□□ 0
LMO4-201ENST00000370542 TKTL2Q9H0I9 626 aa15.08■□□□□ 0
LMO4-201ENST00000370542 COX16Q9P0S2 106 aa15.08■□□□□ 0
LMO4-201ENST00000370542 STAP1Q9ULZ2 295 aa15.08■□□□□ 0
LMO4-201ENST00000370542 L3MBTL1Q9Y468 752 aa15.08■□□□□ 0
LMO4-201ENST00000370542 DOCK9Q9BZ29 2069 aa15.08■□□□□ 0
LMO4-201ENST00000370542 A0A087WV48 116 aa15.07■□□□□ 0
LMO4-201ENST00000370542 CXorf51AA0A1B0GTR3 108 aa15.07■□□□□ 0
LMO4-201ENST00000370542 TMEM120BA0PK00 339 aa15.07■□□□□ 0
LMO4-201ENST00000370542 J3QKU1 62 aa15.07■□□□□ 0
LMO4-201ENST00000370542 TRAFD1O14545 582 aaPredicted RBP15.07■□□□□ 0
LMO4-201ENST00000370542 YKT6O15498 198 aa15.07■□□□□ 0
LMO4-201ENST00000370542 ECEL1O95672 775 aa15.07■□□□□ 0
LMO4-201ENST00000370542 SRCP12931 536 aa15.07■□□□□ 0
LMO4-201ENST00000370542 COILP38432 576 aaPredicted RBP15.07■□□□□ 0
LMO4-201ENST00000370542 C21orf59P57076 290 aa15.07■□□□□ 0
LMO4-201ENST00000370542 NXPH1P58417 271 aa15.07■□□□□ 0
LMO4-201ENST00000370542 PPP2CBP62714 309 aa15.07■□□□□ 0
LMO4-201ENST00000370542 PPP2CAP67775 309 aa15.07■□□□□ 0
LMO4-201ENST00000370542 KLC1Q07866 573 aa15.07■□□□□ 0
LMO4-201ENST00000370542 OVGP1Q12889 678 aa15.07■□□□□ 0
LMO4-201ENST00000370542 BIRC2Q13490 618 aa15.07■□□□□ 0
LMO4-201ENST00000370542 CAMK2BQ13554 666 aa15.07■□□□□ 0
LMO4-201ENST00000370542 ALFQ53S48 1182 aa15.07■□□□□ 0
LMO4-201ENST00000370542 NAPEPLDQ6IQ20 393 aa15.07■□□□□ 0
LMO4-201ENST00000370542 TRNP1Q6NT89 227 aa15.07■□□□□ 0
LMO4-201ENST00000370542 IRGCQ6NXR0 463 aa15.07■□□□□ 0
LMO4-201ENST00000370542 CCDC137Q6PK04 289 aaKnown RBP15.07■□□□□ 0
LMO4-201ENST00000370542 KANSL1Q7Z3B3 1105 aa15.07■□□□□ 0
LMO4-201ENST00000370542 ADAT2Q7Z6V5 191 aaKnown RBP15.07■□□□□ 0
LMO4-201ENST00000370542 NOP9Q86U38 636 aaKnown RBP15.07■□□□□ 0
LMO4-201ENST00000370542 RELL1Q8IUW5 271 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms