RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CTAGE9A4FU28 777 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 GOLGA6CA6NDK9 693 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 GOLGA6BA6NDN3 693 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 C5orf60A6NFR6 353 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 H0Y8X5 98 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 FPGTO14772 594 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 WNT9AO14904 365 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 VILLO15195 856 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 RAD51BO15315 384 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 HEXIM1O94992 359 aaKnown RBP14.87□□□□□ -0.03
COL9A1-204ENST00000370496 CER1O95813 267 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 PRLP01236 227 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 SLC4A1P02730 911 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 GOLGA6DP0CG33 693 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 TCP1P17987 556 aaKnown RBP14.87□□□□□ -0.03
COL9A1-204ENST00000370496 LHCGRP22888 699 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 ACTN2P35609 894 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 HNF1BP35680 557 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 WNT3AP56704 352 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 CLDN2P57739 230 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 IRF4Q15306 451 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 CCNG2Q16589 344 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 QPCTQ16769 361 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 LRRC66Q68CR7 880 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 IL27RAQ6UWB1 636 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 LIPIQ6XZB0 460 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 KYAT3Q6YP21 454 aaKnown RBP14.87□□□□□ -0.03
COL9A1-204ENST00000370496 GCNT7Q6ZNI0 430 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 TSPAN33Q86UF1 283 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 RASGEF1CQ8N431 466 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 MFSD2AQ8NA29 543 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 COG1Q8WTW3 980 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 ASB12Q8WXK4 309 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 LRRC45Q96CN5 670 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 MS4A14Q96JA4 679 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 TRIB3Q96RU7 358 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 MLPHQ9BV36 600 aaPredicted RBP14.87□□□□□ -0.03
COL9A1-204ENST00000370496 TMEM9BQ9NQ34 198 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 HOMER3Q9NSC5 361 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 GOLGA6AQ9NYA3 693 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 ANKRD6Q9Y2G4 727 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 AAR2Q9Y312 384 aaKnown RBP14.87□□□□□ -0.03
COL9A1-204ENST00000370496 ZNF292O60281 2723 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 WDR87Q6ZQQ6 2873 aa14.87□□□□□ -0.03
COL9A1-204ENST00000370496 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 C1orf232A0A0U1RR37 186 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-204ENST00000370496 GOLGA8CPA6NN73 597 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 ANKRD66B4E2M5 251 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 PSMD11O00231 422 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 CES2O00748 559 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 MAGEC1O60732 1142 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 RECQL5O94762 991 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-204ENST00000370496 NDST3O95803 873 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 WNT1P04628 370 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 PCCBP05166 539 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 ITGAVP06756 1048 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 THEGLP0DJG4 465 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 ZNF30P17039 623 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 IGFALSP35858 605 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 OVGP1Q12889 678 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 LRRC14Q15048 493 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 PTPRRQ15256 657 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 KDELC1Q6UW63 502 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 GSTA5Q7RTV2 222 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 IQCHQ86VS3 1027 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 RTP4Q96DX8 246 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 NUS1Q96E22 293 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 MRGPRX2Q96LB1 330 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 LENG8Q96PV6 779 aaPredicted RBP14.86□□□□□ -0.03
COL9A1-204ENST00000370496 SMIM14Q96QK8 99 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 FICDQ9BVA6 458 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 GDF3Q9NR23 364 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 RXFP3Q9NSD7 469 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 PPIL1Q9Y3C6 166 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 LAMA1P25391 3075 aa14.86□□□□□ -0.03
COL9A1-204ENST00000370496 A0A1W2PR77 199 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 TLR4O00206 839 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 GDF9O60383 454 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 GCATO75600 419 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 HLA-DPA1P20036 260 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 STIP1P31948 543 aaKnown RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 RABIFP47224 123 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 ARHGAP8P85298 464 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 KIF19Q2TAC6 998 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 FAXCQ5TGI0 409 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 DRICH1Q6PGQ1 229 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 ABI3BPQ7Z7G0 1075 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 TAB3Q8N5C8 712 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 MINDY1Q8N5J2 469 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 SLC25A41Q8N5S1 370 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 TP53I13Q8NBR0 393 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 OR13H1Q8NG92 308 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 OR2I1PQ8NGU4 316 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 FAM174AQ8TBP5 190 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 NETO1Q8TDF5 533 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 KLHDC7BQ96G42 594 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 KLF6Q99612 283 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 GORASP1Q9BQQ3 440 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms