RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TMEM245Q9H330 911 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 CNOT10Q9H9A5 744 aaKnown RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 IL36AQ9UHA7 158 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 HCN2Q9UL51 889 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 MT-ND3P03897 115 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 APODP05090 189 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 CTSLP07711 333 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 ITGA2BP08514 1039 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 LIMK2P53671 638 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 CDKN3Q16667 212 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 HNRNPA1L2Q32P51 320 aaKnown RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 TIFABQ6ZNK6 161 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 Q7L0L9 218 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 DENND6AQ8IWF6 608 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 C4orf33Q8N1A6 199 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 ZNF366Q8N895 744 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 C2CD4AQ8NCU7 369 aaPredicted RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 OR4K2Q8NGD2 314 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 GRIN3AQ8TCU5 1115 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 SERAC1Q96JX3 654 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 SMC6Q96SB8 1091 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 OSBPL1AQ9BXW6 950 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 SSU72Q9NP77 194 aaKnown RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 POLR3BQ9NW08 1133 aaPredicted RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 THAP10Q9P2Z0 257 aaPredicted RBP23.94■■□□□ 1.42
SNX3-203ENST00000368979 C5orf42Q9H799 3197 aa23.94■■□□□ 1.42
SNX3-203ENST00000368979 TSPAN11A1L157 253 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 LEFTY1O75610 366 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 F7P08709 466 aaPredicted RBP23.93■■□□□ 1.42
SNX3-203ENST00000368979 SPRP35270 261 aaPredicted RBP23.93■■□□□ 1.42
SNX3-203ENST00000368979 HNF1BP35680 557 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 SLC1A2P43004 574 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 TMPRSS15P98073 1019 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 DNAJC3Q13217 504 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 SKIV2LQ15477 1246 aaKnown RBP23.93■■□□□ 1.42
SNX3-203ENST00000368979 MROH9Q5TGP6 573 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 ZNF470Q6ECI4 717 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 SH2D5Q6ZV89 423 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 LYSMD3Q7Z3D4 306 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 SUGP1Q8IWZ8 645 aaKnown RBP23.93■■□□□ 1.42
SNX3-203ENST00000368979 LMNTD2Q8IXW0 634 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 PAF1Q8N7H5 531 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 GABPB2Q8TAK5 448 aaPredicted RBP23.93■■□□□ 1.42
SNX3-203ENST00000368979 CDKN2AIPNLQ96HQ2 116 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 KLHL32Q96NJ5 620 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 TRPV5Q9NQA5 729 aa23.93■■□□□ 1.42
SNX3-203ENST00000368979 EDDM13A0A1B0GTR0 161 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 TMEM120BA0PK00 339 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 CCDC162PA2VCL2 907 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 RRP9O43818 475 aaKnown RBP23.92■■□□□ 1.42
SNX3-203ENST00000368979 RFPL1O75677 317 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 GOT2P00505 430 aaKnown RBP23.92■■□□□ 1.42
SNX3-203ENST00000368979 KRT4P19013 534 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 HMGCLP35914 325 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 CTBP1Q13363 440 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 UGP2Q16851 508 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 GPR153Q6NV75 609 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 BRAT1Q6PJG6 821 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 KIAA0408Q6ZU52 694 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 PLCD3Q8N3E9 789 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 OR6P1Q8NGX9 317 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 EID2BQ96D98 161 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 SCRN2Q96FV2 425 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 MCCC1Q96RQ3 725 aaPredicted RBP23.92■■□□□ 1.42
SNX3-203ENST00000368979 C19orf43Q9BQ61 176 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 PHF7Q9BWX1 381 aaPredicted RBP23.92■■□□□ 1.42
SNX3-203ENST00000368979 SUDS3Q9H7L9 328 aaPredicted RBP23.92■■□□□ 1.42
SNX3-203ENST00000368979 FBRSL1Q9HCM7 1045 aaKnown RBP23.92■■□□□ 1.42
SNX3-203ENST00000368979 IL17CQ9P0M4 197 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 FBXO5Q9UKT4 447 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 STARD13Q9Y3M8 1113 aa23.92■■□□□ 1.42
SNX3-203ENST00000368979 A0A0U1RQS6 177 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 OR51F1A6NGY5 319 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 PRPF4O43172 522 aaKnown RBP eCLIP23.91■■□□□ 1.42
SNX3-203ENST00000368979 SLC4A1P02730 911 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 HLA-EP13747 358 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 GABRB3P28472 473 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 MPP1Q00013 466 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 SLC18A2Q05940 514 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 ARSIQ5FYB1 569 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 C9orf64Q5T6V5 341 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 NUDT18Q6ZVK8 323 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 PTAR1Q7Z6K3 402 aaPredicted RBP23.91■■□□□ 1.42
SNX3-203ENST00000368979 GALNT7Q86SF2 657 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 NDUFAF2Q8N183 169 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 GPR150Q8NGU9 434 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 ALKBH8Q96BT7 664 aaKnown RBP23.91■■□□□ 1.42
SNX3-203ENST00000368979 GUCD1Q96NT3 240 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 GPR63Q9BZJ6 419 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 RHOJQ9H4E5 214 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 KCNK12Q9HB15 430 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 SCN8AQ9UQD0 1980 aa23.91■■□□□ 1.42
SNX3-203ENST00000368979 H7C0S8 307 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 STX7O15400 261 aaKnown RBP23.9■■□□□ 1.42
SNX3-203ENST00000368979 TYROBPO43914 113 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 AHSGP02765 367 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 FOSL2P15408 326 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 CCNFP41002 786 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 IL12RB1P42701 662 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 GALK1P51570 392 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms