RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 GPC6Q9Y625 555 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-203ENST00000368690 FAM95CA0A1B0GW59 222 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 GOLGA8TH3BQL2 631 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 EEF2KO00418 725 aaKnown RBP17.48■□□□□ 0.39
CHTOP-203ENST00000368690 NME4O00746 187 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 CNOT3O75175 753 aaKnown RBP17.48■□□□□ 0.39
CHTOP-203ENST00000368690 MBL2P11226 248 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-203ENST00000368690 SAT1P21673 171 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 RXRGP48443 463 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 STX1BP61266 288 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 FOXM1Q08050 763 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 TRAF2Q12933 501 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 MAP2K5Q13163 448 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 CBX2Q14781 532 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-203ENST00000368690 AMHR2Q16671 573 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 LINC00299Q6ZSB3 139 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 LARP4Q71RC2 724 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHTOP-203ENST00000368690 CUZD1Q86UP6 607 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 HDAC11Q96DB2 347 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 HHIPL1Q96JK4 782 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 MROQ9BYG7 248 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF639Q9UID6 485 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 CITO14578 2027 aa17.48■□□□□ 0.39
CHTOP-203ENST00000368690 IPO13O94829 963 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 SEC24DO94855 1032 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 EIF2S1P05198 315 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF182P17025 639 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 JAK1P23458 1154 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 TM4SF4P48230 202 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 HCAR3P49019 387 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 SLC26A2P50443 739 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 ADARB1P78563 741 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 OXA1LQ15070 435 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CEP97Q8IW35 865 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CCDC117Q8IWD4 279 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 ZC3H7AQ8IWR0 971 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 FBXL20Q96IG2 436 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 MAGED4Q96JG8 741 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CCDC138Q96M89 665 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF641Q96N77 438 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF347Q96SE7 839 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 SLC9A7Q96T83 725 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 PSD2Q9BQI7 771 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 EIF2AQ9BY44 585 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 ABHD16BQ9H3Z7 469 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 NANOGQ9H9S0 305 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 INTS10Q9NVR2 710 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 SFMBT1Q9UHJ3 866 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 MAGED2Q9UNF1 606 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 NME7Q9Y5B8 376 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CORINQ9Y5Q5 1042 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 UMPSP11172 480 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 LCP1P13796 627 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 HNRNPLP14866 589 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 GPX3P22352 226 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 RPS9P46781 194 aaKnown RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 GJA8P48165 433 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 POU4F1Q01851 419 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 TNK2Q07912 1038 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 SEPT6Q14141 434 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 PPP1R3AQ16821 1122 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 COQ5Q5HYK3 327 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 PRAMEF19Q5SWL8 479 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 MORN1Q5T089 497 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 OTUD1Q5VV17 481 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-203ENST00000368690 PKN3Q6P5Z2 889 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 LAYNQ6UX15 382 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CCDC80Q76M96 950 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 FUNDC1Q8IVP5 155 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 DEFB106AQ8N104 65 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 FAM110BQ8TC76 370 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 HDAC10Q969S8 669 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CYP2S1Q96SQ9 504 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 OMDQ99983 421 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 GMIPQ9P107 970 aa17.47■□□□□ 0.39
CHTOP-203ENST00000368690 CCDC78A2IDD5 438 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 CA12O43570 354 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF24P17028 368 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 RFC2P35250 354 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 NOGQ13253 232 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 PRPSAP1Q14558 356 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 TRIM16LQ309B1 348 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 DEFB115Q30KQ5 88 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 TECRLQ5HYJ1 363 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 PCID2Q5JVF3 399 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 IGFN1Q86VF2 1251 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 SPPL2CQ8IUH8 684 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 SLC22A9Q8IVM8 553 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 MFSD6LQ8IWD5 586 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 DDIASQ8IXT1 998 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 SFRP1Q8N474 314 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 NETO2Q8NC67 525 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 HEXDCQ8WVB3 486 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 NPY6RQ99463 290 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 SCHIP1Q9P0W5 487 aaPredicted RBP17.46■□□□□ 0.39
CHTOP-203ENST00000368690 IFT80Q9P2H3 777 aaPredicted RBP17.46■□□□□ 0.39
CHTOP-203ENST00000368690 DERAQ9Y315 318 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 J3QRK9 145 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms