RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C1orf232A0A0U1RR37 186 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 TCRBV7S3A2A0A539 114 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 RAD51CO43502 376 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 TM7SF2O76062 418 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 HEXIM1O94992 359 aaKnown RBP13.93□□□□□ -0.18
TPM3-211ENST00000368531 FGF1P05230 155 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 IGHV4-34P06331 123 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 ELFN1P0C7U0 828 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 C6P13671 934 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 HLA-DPA1P20036 260 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 LHCGRP22888 699 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 ITPKAP23677 461 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 GRIA1P42261 906 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 CCR5P51681 352 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 SGCGQ13326 291 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 PTK6Q13882 451 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 DHX34Q14147 1143 aaKnown RBP13.93□□□□□ -0.18
TPM3-211ENST00000368531 FGL2Q14314 439 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 CNGA3Q16281 694 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 ZNF284Q2VY69 593 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 LYSMD4Q5XG99 296 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 LRRC66Q68CR7 880 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 NAPEPLDQ6IQ20 393 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 KIAA1161Q6NSJ0 714 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 NEK5Q6P3R8 708 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 LYSMD3Q7Z3D4 306 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 HSD11B1LQ7Z5J1 315 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 TRIM69Q86WT6 500 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 KLHDC8BQ8IXV7 354 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 MNS1Q8NEH6 495 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 OR52K1Q8NGK4 314 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 BLOC1S5Q8TDH9 187 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 SPOCK2Q92563 424 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 SLCO2A1Q92959 643 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 ZC3H10Q96K80 434 aaKnown RBP13.93□□□□□ -0.18
TPM3-211ENST00000368531 MCCC1Q96RQ3 725 aaPredicted RBP13.93□□□□□ -0.18
TPM3-211ENST00000368531 HINFPQ9BQA5 517 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 CARD6Q9BX69 1037 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 SLC17A9Q9BYT1 436 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 GPR63Q9BZJ6 419 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 EBF2Q9HAK2 575 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 FZD3Q9NPG1 666 aa13.93□□□□□ -0.18
TPM3-211ENST00000368531 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.93□□□□□ -0.18
TPM3-211ENST00000368531 RALGAPA1Q6GYQ0 2036 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.92□□□□□ -0.18
TPM3-211ENST00000368531 CTAGE15A4D2H0 777 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
TPM3-211ENST00000368531 GOLGA8MH3BSY2 632 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 AURKAO14965 403 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 CTAGE8P0CG41 777 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 CREB5Q02930 508 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 MTM1Q13496 603 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 TMEM259Q4ZIN3 620 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 SETMARQ53H47 684 aaPredicted RBP13.92□□□□□ -0.18
TPM3-211ENST00000368531 ANKRD22Q5VYY1 191 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 DENND5AQ6IQ26 1287 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 RFLNAQ6ZTI6 216 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 SYDE1Q6ZW31 735 aaPredicted RBP13.92□□□□□ -0.18
TPM3-211ENST00000368531 LINC00523Q86TU6 105 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 CTAGE6Q86UF2 777 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 CTAGE4Q8IX94 777 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 CPT1BQ92523 772 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 PIGKQ92643 395 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 PCED1AQ9H1Q7 454 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 EPC1Q9H2F5 836 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 MAGEE1Q9HCI5 957 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 SMG5Q9UPR3 1016 aaKnown RBP13.92□□□□□ -0.18
TPM3-211ENST00000368531 CA5BQ9Y2D0 317 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 ZNF711Q9Y462 761 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 SLCO1B1Q9Y6L6 691 aa13.92□□□□□ -0.18
TPM3-211ENST00000368531 EFCAB8A8MWE9 144 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 RAD51BO15315 384 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 BUD23O43709 281 aaKnown RBP13.91□□□□□ -0.18
TPM3-211ENST00000368531 RECQL5O94762 991 aaPredicted RBP13.91□□□□□ -0.18
TPM3-211ENST00000368531 C1SP09871 688 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 SLC7A5Q01650 507 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 PTSQ03393 145 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 SEPT6Q14141 434 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 KCNJ11Q14654 390 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 CCDC6Q16204 474 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 WDR45BQ5MNZ6 344 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 IZUMO3Q5VZ72 239 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 Q6ZVL8 140 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 CYP2U1Q7Z449 544 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 MAATS1Q7Z4T9 603 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 CEP112Q8N8E3 955 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 CCHCR1Q8TD31 782 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 C1QTNF2Q9BXJ5 285 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 DPH5Q9H2P9 285 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 ZFYVE1Q9HBF4 777 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 BPIFA1Q9NP55 256 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 CD84Q9UIB8 345 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 TPX2Q9ULW0 747 aaKnown RBP13.91□□□□□ -0.18
TPM3-211ENST00000368531 SNX24Q9Y343 169 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 SDK1Q7Z5N4 2213 aa13.91□□□□□ -0.18
TPM3-211ENST00000368531 A0A1W2PPC4 97 aa13.9□□□□□ -0.18
TPM3-211ENST00000368531 CCDC78A2IDD5 438 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms