RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CA4P22748 312 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 CTSKP43235 329 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 EPHB1P54762 984 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 QPCTQ16769 361 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 PRAMEF14Q5SWL7 426 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 KDELC1Q6UW63 502 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 ABI3BPQ7Z7G0 1075 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 SPATS2Q86XZ4 545 aaKnown RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 MFSD2AQ8NA29 543 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 OR13H1Q8NG92 308 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 LENG8Q96PV6 779 aaPredicted RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 FCRL5Q96RD9 977 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 TMEM121Q9BTD3 319 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 GBA3Q9H227 469 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 RSPH14Q9UHP6 348 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 TRHDEQ9UKU6 1024 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 TLR4O00206 839 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 LIASO43766 372 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 LZTS3O60299 673 aaPredicted RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 HEXIM1O94992 359 aaKnown RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 FGGP02679 453 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 THEGLP0DJG4 465 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 ATXN3P54252 364 aaPredicted RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 C21orf59P57076 290 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 NXPH1P58417 271 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 IRF4Q15306 451 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 SLC14A2Q15849 920 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 RSPO4Q2I0M5 234 aaPredicted RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 HLA-BQ31612 363 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 DENND2CQ68D51 928 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 USP45Q70EL2 814 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 SLC22A18ASQ8N1D0 253 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 FAM71DQ8N9W8 422 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 NETO1Q8TDF5 533 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 NAPGQ99747 312 aaPredicted RBP15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 GAREM1Q9H706 876 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 CAAP1Q9H8G2 361 aa15.12■□□□□ 0.01
SMPDL3A-201ENST00000368440 CAPN8A6NHC0 703 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 RECQL5O94762 991 aaPredicted RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 CYP2A6P11509 494 aaPredicted RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 PSMB4P28070 264 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 LIMK1P53667 647 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 CDK18Q07002 472 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 SNX1Q13596 522 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 OASLQ15646 514 aaKnown RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 WSCD2Q2TBF2 565 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 UAP1L1Q3KQV9 507 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 TPRG1LQ5T0D9 272 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 CRTC1Q6UUV9 634 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 KYAT3Q6YP21 454 aaKnown RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 HSD11B1LQ7Z5J1 315 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 PTAR1Q7Z6K3 402 aaPredicted RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 DENND6BQ8NEG7 585 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 RMDN1Q96DB5 314 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 MRGPRX2Q96LB1 330 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 COQ10AQ96MF6 247 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 SPATA13Q96N96 652 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 MLPHQ9BV36 600 aaPredicted RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 ZDHHC5Q9C0B5 715 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 FAM153AQ9UHL3 310 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 FNDC3AQ9Y2H6 1198 aaKnown RBP15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 HS3ST3A1Q9Y663 406 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 SCN8AQ9UQD0 1980 aa15.11■□□□□ 0.01
SMPDL3A-201ENST00000368440 CFAP69A5D8W1 941 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 A6NNZ2 444 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 ANKRD66B4E2M5 251 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 FPGTO14772 594 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 PIRTP0C851 137 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 WNT3AP56704 352 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 RPL26P61254 145 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 ACOX1Q15067 660 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 AGERQ15109 404 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 LRRC66Q68CR7 880 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 Q6ZSR6 202 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 RFLNAQ6ZTI6 216 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 IQCHQ86VS3 1027 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 PELI3Q8N2H9 469 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 CBARPQ8N350 705 aaPredicted RBP15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 KLHDC7BQ96G42 594 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 MS4A14Q96JA4 679 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 SMARCAL1Q9NZC9 954 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 RPL26L1Q9UNX3 145 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 C5orf60A6NFR6 353 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 C1SP09871 688 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 ETV3P41162 512 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 CHRNA4P43681 627 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 IL9RQ01113 521 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 OLIG2Q13516 323 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 LRRC14Q15048 493 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 CDKN3Q16667 212 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 LONRF2Q1L5Z9 754 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 ZNF423Q2M1K9 1284 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 ITPRIPL1Q6GPH6 555 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 PLA2G15Q8NCC3 412 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 IPMKQ8NFU5 416 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
SMPDL3A-201ENST00000368440 FERMT1Q9BQL6 677 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms