RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 RFX6Q8HWS3 928 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 PHACTR4Q8IZ21 702 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 PAF1Q8N7H5 531 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 CCNYQ8ND76 341 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 TPCN2Q8NHX9 752 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 TBATAQ96M53 351 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 SMIM14Q96QK8 99 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 TDRD1Q9BXT4 1180 aaKnown RBP19■□□□□ 0.63
CKS1B-203ENST00000368439 OR1A2Q9Y585 309 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 HEY1Q9Y5J3 304 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 U3KQA8 63 aa19■□□□□ 0.63
CKS1B-203ENST00000368439 KNTC1P50748 2209 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 NEMP2A6NFY4 417 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 KCNK1O00180 336 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 AQP9O43315 295 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 GCATO75600 419 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 JCHAINP01591 159 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 ZFXP17010 805 aaPredicted RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 TRIM23P36406 574 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 MARCKSL1P49006 195 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 ADCY2Q08462 1091 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 CCDC157Q569K6 752 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 KCTD16Q68DU8 428 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 ESRP1Q6NXG1 681 aaKnown RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 TSPAN33Q86UF1 283 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 MARCH9Q86YJ5 346 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 FAM181AQ8N9Y4 354 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 KDF1Q8NAX2 398 aaPredicted RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 BTN2A2Q8WVV5 523 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 FUBP1Q96AE4 644 aaKnown RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 APOLD1Q96LR9 279 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 ZNF830Q96NB3 372 aaPredicted RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 LRRC61Q9BV99 259 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 MAK16Q9BXY0 300 aaKnown RBP18.99■□□□□ 0.63
CKS1B-203ENST00000368439 DUSP10Q9Y6W6 482 aa18.99■□□□□ 0.63
CKS1B-203ENST00000368439 A0A0U1RQS6 177 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 ALPIP09923 528 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CYP2A6P11509 494 aaPredicted RBP18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CKMT1AP12532 417 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 KRT10P13645 584 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CTPS1P17812 591 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CDC25BP30305 580 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CLDN6P56747 220 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 ILKQ13418 452 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CAMK2BQ13554 666 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 ACOX1Q15067 660 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 ALG11Q2TAA5 492 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 SPOCD1Q6ZMY3 1216 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 HSD11B1LQ7Z5J1 315 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 KATNAL2Q8IYT4 538 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 GALNT15Q8N3T1 639 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.98■□□□□ 0.63
CKS1B-203ENST00000368439 LMX1AQ8TE12 382 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 LACRTQ9GZZ8 138 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 CLPBQ9H078 707 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 LUC7LQ9NQ29 371 aaKnown RBP18.98■□□□□ 0.63
CKS1B-203ENST00000368439 SPASTQ9UBP0 616 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 APOBEC3BQ9UH17 382 aaKnown RBP18.98■□□□□ 0.63
CKS1B-203ENST00000368439 FREM2Q5SZK8 3169 aa18.98■□□□□ 0.63
CKS1B-203ENST00000368439 ASXL3Q9C0F0 2248 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 A0A0J9YYE9 177 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 BTNL10A8MVZ5 291 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 PSMD11O00231 422 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 TPP1O14773 563 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 TRBC1P01850 177 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 HOXC4P09017 264 aaPredicted RBP18.97■□□□□ 0.63
CKS1B-203ENST00000368439 ALPPL2P10696 532 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 CDK4P11802 303 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 MYF5P13349 255 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 HNF1BP35680 557 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 HK3P52790 923 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 KIAA1024LP59773 190 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 DYNLT1P63172 113 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 PPARDQ03181 441 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 C1orf61Q13536 156 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 PDK1Q15118 436 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 ST3GAL2Q16842 350 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 PNCKQ6P2M8 343 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 CRTC1Q6UUV9 634 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 ENPP7Q6UWV6 458 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 TECPR1Q7Z6L1 1165 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 TMPRSS12Q86WS5 348 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 ACRBPQ8NEB7 543 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 KRT35Q92764 455 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 TSACCQ96A04 125 aaPredicted RBP18.97■□□□□ 0.63
CKS1B-203ENST00000368439 NUS1Q96E22 293 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 DTD2Q96FN9 168 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 DUSP23Q9BVJ7 150 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 SAE1Q9UBE0 346 aaPredicted RBP18.97■□□□□ 0.63
CKS1B-203ENST00000368439 CHKBQ9Y259 395 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 TTLL3Q9Y4R7 772 aa18.97■□□□□ 0.63
CKS1B-203ENST00000368439 COL27A1Q8IZC6 1860 aaPredicted RBP18.97■□□□□ 0.63
CKS1B-203ENST00000368439 hCG_1818297A0A087WSY0 165 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 FAM149AA5PLN7 773 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 TMEM202A6NGA9 273 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 PJA2O43164 708 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 CST8O60676 142 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 CELA2BP08218 269 aaPredicted RBP18.96■□□□□ 0.63
CKS1B-203ENST00000368439 PECAM1P16284 738 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms