RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC25A45Q8N413 288 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 RNF10Q8N5U6 811 aaKnown RBP9.89□□□□□ -0.83
CD48-202ENST00000368046 LRRC57Q8N9N7 239 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 KRT35Q92764 455 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 HEMGNQ9BXL5 484 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 SAE1Q9UBE0 346 aaPredicted RBP9.89□□□□□ -0.83
CD48-202ENST00000368046 B4GALT6Q9UBX8 382 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 AMFRQ9UKV5 643 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 APOBEC2Q9Y235 224 aaKnown RBP9.89□□□□□ -0.83
CD48-202ENST00000368046 COQ6Q9Y2Z9 468 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 PI4KAP42356 2102 aa9.89□□□□□ -0.83
CD48-202ENST00000368046 ADAMTS9Q9P2N4 1935 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 NEMP2A6NFY4 417 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ARHGAP6O43182 974 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 MTSS1O43312 755 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 HEXIM1O94992 359 aaKnown RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 LDOC1O95751 146 aaPredicted RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 PRLP01236 227 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 HLA-DQB2P05538 268 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ELFN1P0C7U0 828 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 VIPR1P32241 457 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 HNF1BP35680 557 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 IGFALSP35858 605 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 TRIM23P36406 574 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 MARCKSL1P49006 195 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 RPL26P61254 145 aaKnown RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 SKOR1P84550 965 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ZBTB17Q13105 803 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 MTM1Q13496 603 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ACOX1Q15067 660 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ZNF542PQ5EBM4 170 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 BBS12Q6ZW61 710 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 PEX26Q7Z412 305 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 SLCO6A1Q86UG4 719 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 NT5DC3Q86UY8 548 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 PARGQ86W56 976 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 LRRC8AQ8IWT6 810 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.88□□□□□ -0.83
CD48-202ENST00000368046 EID2Q8N6I1 236 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 CCDC112Q8NEF3 446 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 TFB1MQ8WVM0 346 aaKnown RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 BTN2A2Q8WVV5 523 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 TEKT5Q96M29 485 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 COQ10AQ96MF6 247 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 MCCC1Q96RQ3 725 aaPredicted RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 DESI2Q9BSY9 194 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 APOOQ9BUR5 198 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 TDRD1Q9BXT4 1180 aaKnown RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 PCDH9Q9HC56 1237 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ANGPTL2Q9UKU9 493 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 RPL26L1Q9UNX3 145 aaKnown RBP9.88□□□□□ -0.83
CD48-202ENST00000368046 CHKBQ9Y259 395 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 TTLL3Q9Y4R7 772 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 CACNA1EQ15878 2313 aa9.88□□□□□ -0.83
CD48-202ENST00000368046 PLXNA2O75051 1894 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 NYNRINQ9P2P1 1898 aaKnown RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 A0A0J9YYE9 177 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 A0A0U1RQJ8 604 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 MACROD2A1Z1Q3 448 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 GRID2IPA4D2P6 1211 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 MIF4GDA9UHW6 222 aaKnown RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 HACD1B0YJ81 288 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 ANKRD66B4E2M5 251 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 APOC4-APOC2K7ER74 178 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 PSMD11O00231 422 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 KRT86O43790 486 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 SDC3O75056 442 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 PIAS2O75928 621 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 TRBC1P01850 177 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 APOC2P02655 101 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 MMP2P08253 660 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 HOXC4P09017 264 aaPredicted RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 ATXN1LP0C7T5 689 aaKnown RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 FTH1P19P0C7X4 201 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 PYGMP11217 842 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 NME1P15531 152 aaKnown RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 PECAM1P16284 738 aaPredicted RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 CTPS1P17812 591 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 GM2AP17900 193 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 HTR1BP28222 390 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 CD86P42081 329 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 BLKP51451 505 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 EPHB1P54762 984 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 SHC2P98077 582 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 PTSQ03393 145 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 FOXC1Q12948 553 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 EIF2B5Q13144 721 aaKnown RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 XRCC4Q13426 336 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 ARHGEF7Q14155 803 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 PRKD1Q15139 912 aaPredicted RBP9.87□□□□□ -0.83
CD48-202ENST00000368046 PTPRRQ15256 657 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 IRF4Q15306 451 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 CNGA3Q16281 694 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 TPRG1LQ5T0D9 272 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 CRTC1Q6UUV9 634 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 USP45Q70EL2 814 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 B4GALNT4Q76KP1 1039 aa9.87□□□□□ -0.83
CD48-202ENST00000368046 ZC3H18Q86VM9 953 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms