RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SRRM5B3KS81 715 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 NKX2-8O15522 239 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 FFAR2O15552 330 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 IDH3BO43837 385 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGA12O60330 932 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 B4GALT2O60909 372 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CTSVO60911 334 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 COQ9O75208 318 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TRMUO75648 421 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 NDUFB4O95168 129 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 DDAH2O95865 285 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 IGKV1-17P01599 117 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 RAF1P04049 648 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 HOXD4P09016 255 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 IGHV4-38-2P0DP08 117 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 KITP10721 976 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 SELLP14151 372 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 HOXB9P17482 250 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 GNAZP19086 355 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 BTF3P20290 206 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 S1PR1P21453 382 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 RRM1P23921 792 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 GRK5P34947 590 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 SOX3P41225 446 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 SKIV2L2P42285 1042 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 MAPK9P45984 424 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 HDAC4P56524 1084 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 GSCP56915 257 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 RPL24P83731 157 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 HNRNPDQ14103 355 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CSHL1Q14406 222 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF234Q14588 700 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TEAD2Q15562 447 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 BRDTQ58F21 947 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TFDP3Q5H9I0 405 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CELF3Q5SZQ8 465 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 MAP3K21Q5TCX8 1036 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 FAXCQ5TGI0 409 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 RNLSQ5VYX0 342 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 RGMBQ6NW40 437 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TTI2Q6NXR4 508 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 IGFL2Q6UWQ7 119 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CCBE1Q6UXH8 406 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PIK3AP1Q6ZUJ8 805 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ASB18Q6ZVZ8 466 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 SLC25A42Q86VD7 318 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TMTC1Q8IUR5 882 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 C1orf87Q8N0U7 546 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 SDR16C5Q8N3Y7 309 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 AFAP1L2Q8N4X5 818 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ENDOVQ8N8Q3 282 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 Q8N9L7 120 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ARRDC2Q8TBH0 407 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 MIPOL1Q8TD10 442 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CHAC2Q8WUX2 184 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ABTB1Q969K4 478 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 GRAMD1AQ96CP6 724 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 NMD3Q96D46 503 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 STARD4Q96DR4 205 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 MVB12AQ96EY5 273 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 GIMAP5Q96F15 307 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 LINGO1Q96FE5 620 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 MXD3Q9BW11 206 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CLEC7AQ9BXN2 247 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 BRINP2Q9C0B6 783 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 XRN2Q9H0D6 950 aaKnown RBP eCLIP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PUS7LQ9H0K6 701 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TP63Q9H3D4 680 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZBTB20Q9HC78 741 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 Q9N2J8 555 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 HEYLQ9NQ87 328 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF71Q9NQZ8 489 aaPredicted RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 SACM1LQ9NTJ5 587 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ABCD2Q9UBJ2 740 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF212Q9UDV6 495 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 GTF3C4Q9UKN8 822 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 TSPAN16Q9UKR8 245 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PLCL2Q9UPR0 1127 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 LAS1LQ9Y4W2 734 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGA9Q9Y5G4 932 aaKnown RBP0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGA8Q9Y5G5 932 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGA7Q9Y5G6 932 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGA6Q9Y5G7 932 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGA3Q9Y5H0 932 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 MUC6Q6W4X9 2439 aa0.06□□□□□ -2.4
RNU6-54P-201ENST00000365563 CYP3A7-CYP3A51PA0A087WV96 503 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ASB14A6NK59 587 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 SH2D7A6NKC9 451 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 RHPN2P1A8MT19 583 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 M0QZQ0 153 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 KCNN4O15554 427 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNHIT1O43257 154 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 DFNA5O60443 496 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 LRP3O75074 770 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 PDE9AO76083 593 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 MTA2O94776 668 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 AP2A2O94973 939 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 LARGE1O95461 756 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 TSHBP01222 138 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 VIPP01282 170 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms