RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 NDUFB7P17568 137 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ENGP17813 658 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ITGAXP20702 1163 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 AGAP20933 346 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 COMTP21964 271 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 IL10P22301 178 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 EPHB2P29323 1055 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MTHFRP42898 656 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CLCN3P51790 818 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 COPB1P53618 953 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TPD52P55327 224 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 STX1BP61266 288 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CRHR2Q13324 411 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CAPSQ13938 189 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RCN2Q14257 317 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TAF7Q15545 349 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TCTN1Q2MV58 587 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 USP41Q3LFD5 358 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RNASE12Q5GAN4 147 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ARL13AQ5H913 290 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NT5DC1Q5TFE4 455 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SFMBT2Q5VUG0 894 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 VSTM1Q6UX27 236 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TSPAN33Q86UF1 283 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 HOOK3Q86VS8 718 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CEP57Q86XR8 500 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MFN1Q8IWA4 741 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SCYL3Q8IZE3 742 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SYCP3Q8IZU3 236 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ANKRD20A12PQ8NF67 263 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 OR52N4Q8NGI2 321 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PSMA8Q8TAA3 256 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 HDAC7Q8WUI4 952 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 FBXL20Q96IG2 436 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 LINC00615Q96LM1 132 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZNF830Q96NB3 372 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZNF347Q96SE7 839 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SIN3AQ96ST3 1273 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CDRT15Q96T59 188 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TMEM47Q9BQJ4 181 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NUF2Q9BZD4 464 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 C1orf21Q9H246 121 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZNF768Q9H5H4 540 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SERTAD4Q9NUC0 356 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 INTS10Q9NVR2 710 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CHCHD3Q9NX63 227 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 DLL3Q9NYJ7 618 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CWC15Q9P013 229 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 AKAP7Q9P0M2 348 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 DKK2Q9UBU2 259 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 HOOK1Q9UJC3 728 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ADAMTS5Q9UNA0 930 aa3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 R3HDM2Q9Y2K5 976 aaKnown RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 A0A1W2PRV1 198 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 MAGEB17A8MXT2 336 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TXNL1O43396 289 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SPRY1O43609 319 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PEX1O43933 1283 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 JRKO75564 520 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SLCO2B1O94956 709 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 GCNT3O95395 438 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZFYP08048 801 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CHRM2P08172 466 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 AKR1A1P14550 325 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PDGFRAP16234 1089 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ANXA7P20073 488 aaKnown RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 EDN2P20800 178 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ACHEP22303 614 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PTPN3P26045 913 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 YWHAQP27348 245 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ACADLP28330 430 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CHRNA5P30532 468 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RYKP34925 604 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 HSPA4P34932 840 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 FOLR3P41439 243 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 PRCPP42785 496 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CENPAP49450 140 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 NT5C2P49902 561 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 SLC12A3P55017 1021 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 CLDN2P57739 230 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 EEFSECP57772 596 aaKnown RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 STARD6P59095 220 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TAS2R40P59535 323 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ECT2LQ008S8 904 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TEFQ10587 303 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 LASP1Q14847 261 aaKnown RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TXNRD1Q16881 649 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 VMACQ2NL98 169 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 TWISTNBQ3B726 338 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 DPY19L2P1Q6NXN4 242 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 WDR73Q6P4I2 378 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 ZNF474Q6S9Z5 364 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 DHRS13Q6UX07 377 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 RANBP10Q6VN20 620 aa3.78□□□□□ -1.8
RNU6-1249P-201ENST00000363237 GBP6Q6ZN66 633 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms