RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 DTLQ9NZJ0 730 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 EVLQ9UI08 416 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 TCRBV5S1A1TA0A578 114 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 ALOX12P18054 663 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CXCR3P49682 368 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 IST1P53990 364 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CAMK2BQ13554 666 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CSHL1Q14406 222 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 IER5Q5VY09 327 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 DEFB106AQ8N104 65 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CSF3RQ99062 836 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CHID1Q9BWS9 393 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TRIT1Q9H3H1 467 aaKnown RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 VANGL2Q9ULK5 521 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 SLC30A1Q9Y6M5 507 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 ZNFX1Q9P2E3 1918 aaKnown RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 SPATA31C2B4DYI2 1134 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CLDN5O00501 218 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 PMPCBO75439 489 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 STBD1O95210 358 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 INHBBP09529 407 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TXNP10599 105 aaKnown RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CDH1P12830 882 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CCNA1P78396 465 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 ECT2LQ008S8 904 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 IFITM3Q01628 133 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 FOXD4Q12950 439 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 MAPRE2Q15555 327 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 MEP1AQ16819 746 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 UGT3A1Q6NUS8 523 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 ZPBP2Q6X784 338 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 KCNMB4Q86W47 210 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 PLD3Q8IV08 490 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 MAELQ96JY0 434 aaKnown RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 AS3MTQ9HBK9 375 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 NEK6Q9HC98 313 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 PRDM8Q9NQV8 689 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TIMM13Q9Y5L4 95 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 NOBOXO60393 691 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CILPO75339 1184 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 LDLRP01130 860 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CDH13P55290 713 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 MXD4Q14582 209 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 GPR162Q16538 588 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 CCNYL2Q5T2Q4 361 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 EDEM1Q92611 657 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 KCTD15Q96SI1 283 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-201ENST00000361716 RBBP8Q99708 897 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TRIM15Q9C019 465 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TOR3AQ9H497 397 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 AASSQ9UDR5 926 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 KLHL3Q9UH77 587 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 TCAF1Q9Y4C2 921 aa12.74□□□□□ -0.37
VAMP1-201ENST00000361716 ZSCAN5BA6NJL1 495 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 TRPC5OSA6NMA1 111 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 SUPT7LO94864 414 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 INMTO95050 263 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 RACK1P63244 317 aaKnown RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 RBP5P82980 135 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 DAB2P98082 770 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 SLC6A3Q01959 620 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 NDUFA5Q16718 116 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 INSCQ1MX18 579 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 AFAP1L2Q8N4X5 818 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 SLC2A14Q8TDB8 520 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 SH3GL1Q99961 368 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 MROQ9BYG7 248 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 ATP13A3Q9H7F0 1226 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 SNTG2Q9NY99 539 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 CACNG4Q9UBN1 327 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 IPO11Q9UI26 975 aaKnown RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 COMMD10Q9Y6G5 202 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 DLX3O60479 287 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 C8BP07358 591 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF286BP0CG31 522 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 IL4RP24394 825 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 GTF2E2P29084 291 aaKnown RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 ADSLP30566 484 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 NIPAL4Q0D2K0 466 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 FAM209AQ5JX71 171 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 PAF1Q8N7H5 531 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 NDNFQ8TB73 568 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 C18orf25Q96B23 403 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 CENPNQ96H22 339 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-201ENST00000361716 CTRCQ99895 268 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 TRPV5Q9NQA5 729 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 MID2Q9UJV3 735 aa12.73□□□□□ -0.37
VAMP1-201ENST00000361716 PTBP2Q9UKA9 531 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms