RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LPCAT2Q7L5N7 544 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 POU5F2Q8N7G0 328 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 SDCBP2Q9H190 292 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 MIR1-1HGQ9H1L0 117 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 MYLK2Q9H1R3 596 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 ANAPC2Q9UJX6 822 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 KCNE1P15382 129 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 IDSP22304 550 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 SPIRE1Q08AE8 756 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 KRR1Q13601 381 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 POM121L1PQ3SYA9 428 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 TIGD5Q53EQ6 642 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 CHSY3Q70JA7 882 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 C11orf74Q86VG3 221 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 LRRC57Q8N9N7 239 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 FAM83DQ9H4H8 585 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 REEP1Q9H902 201 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 EIF2B3Q9NR50 452 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 CDK14O94921 469 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 EIF2S1P05198 315 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 ATP6V1B1P15313 513 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 CAP1Q01518 475 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 MRPL28Q13084 256 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 CERCAMQ5T4B2 595 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ZNF618Q5T7W0 954 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 C17orf64Q86WR6 236 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 OR52K2Q8NGK3 314 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 HEPHQ9BQS7 1158 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ANGPT4Q9Y264 503 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 MFHAS1Q9Y4C4 1052 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ZNF536O15090 1300 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 CHD2O14647 1828 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 INSIG1O15503 277 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 PEX11AO75192 247 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 PROCP04070 461 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 CDCA2Q69YH5 1023 aaPredicted RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 ZNF549Q6P9A3 640 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 CNSTQ6PJW8 725 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 GPR180Q86V85 440 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 RASAL3Q86YV0 1011 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 CDYL2Q8N8U2 506 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 SRFBP1Q8NEF9 429 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 OR6Y1Q8NGX8 325 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 FERD3LQ96RJ6 166 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 CNTN3Q9P232 1028 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ZNF180Q9UJW8 692 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 TPRKBQ9Y3C4 175 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 A0A0U1RQJ8 604 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 LRRC72A6NJI9 287 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 HGFP14210 728 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ITGA2P17301 1181 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 DDX6P26196 483 aaKnown RBP eCLIP13.49□□□□□ -0.25
LDB3-202ENST00000361373 ERVK-21P61565 698 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 IL5RAQ01344 420 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 IZUMO2Q6UXV1 221 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 UBE2R2Q712K3 238 aaPredicted RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 TMEM139Q8IV31 216 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 UTP15Q8TED0 518 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 KCTD13Q8WZ19 329 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 GLMNQ92990 594 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ACDQ96AP0 544 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 EPB41L4BQ9H329 900 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 PIF1Q9H611 641 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ZFP14Q9HCL3 533 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 PLK2Q9NYY3 685 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 EVLQ9UI08 416 aaPredicted RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 TTMPQ5BVD1 217 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 MFSD5Q6N075 450 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 TAPT1Q6NXT6 567 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 PTCD3Q96EY7 689 aaKnown RBP13.49□□□□□ -0.25
LDB3-202ENST00000361373 TPD52L3Q96J77 140 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 ARMCX1Q9P291 453 aa13.49□□□□□ -0.25
LDB3-202ENST00000361373 SASH3O75995 380 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 TGDSO95455 350 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 C2P06681 752 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 EPHX1P07099 455 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 BNIP2Q12982 314 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 YTHDF3Q7Z739 585 aaKnown RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 STK32CQ86UX6 486 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 NELL1Q92832 810 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 FZD10Q9ULW2 581 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 TLR6Q9Y2C9 796 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 H3BM21 787 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 PDE9AO76083 593 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 UNGP13051 313 aaPredicted RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 CRHR1P34998 444 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 SOWAHAQ2M3V2 549 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 ZNF697Q5TEC3 545 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 EXOC3L1Q86VI1 746 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 ZNF599Q96NL3 588 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms