RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 HTRA3P83110 453 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 HECTD2Q5U5R9 776 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 FOXB2Q5VYV0 432 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 ALG1LQ6GMV1 187 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 HPS6Q86YV9 775 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 NSMCE3Q96MG7 304 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 OR52B2Q96RD2 323 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 RNF208Q9H0X6 261 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 VCX3BQ9H321 246 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 ZDHHC2Q9UIJ5 367 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 ADAMTS6Q9UKP5 1117 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 ABLIM3O94929 683 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 S1PR4O95977 384 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 EPOP01588 193 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 TFEBP19484 476 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 GALNT7Q86SF2 657 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 KBTBD6Q86V97 674 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 RNF135Q8IUD6 432 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 TXNDC5Q8NBS9 432 aaKnown RBP22.68■■□□□ 1.22
LDB1-201ENST00000361198 DNAJC1Q96KC8 554 aaKnown RBP22.68■■□□□ 1.22
LDB1-201ENST00000361198 LENG8Q96PV6 779 aaPredicted RBP22.68■■□□□ 1.22
LDB1-201ENST00000361198 MGME1Q9BQP7 344 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 FAM192AQ9GZU8 254 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 TRPM5Q9NZQ8 1165 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 UBTFL6P0CB48 400 aaPredicted RBP22.67■■□□□ 1.22
LDB1-201ENST00000361198 RGRP47804 291 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 TLE2Q04725 743 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 BTG3Q14201 252 aaPredicted RBP22.67■■□□□ 1.22
LDB1-201ENST00000361198 SLC39A5Q6ZMH5 540 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 WBP2Q969T9 261 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 PLD4Q96BZ4 506 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 CCDC124Q96CT7 223 aaKnown RBP22.67■■□□□ 1.22
LDB1-201ENST00000361198 PPP1R36Q96LQ0 422 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 SPATS2LQ9NUQ6 558 aaKnown RBP22.67■■□□□ 1.22
LDB1-201ENST00000361198 SSX2IPQ9Y2D8 614 aa22.67■■□□□ 1.22
LDB1-201ENST00000361198 GOLGA8QA0A0J9YX86 632 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 GOLGA8OA6NCC3 632 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 NEMP2A6NFY4 417 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 GOLGA8NF8WBI6 632 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 CASQ2O14958 399 aaPredicted RBP22.66■■□□□ 1.22
LDB1-201ENST00000361198 HDAC3O15379 428 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 ACVR1Q04771 509 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 PRKAA1Q13131 559 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 PEX6Q13608 980 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 FAM83EQ2M2I3 478 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 ACAD11Q709F0 780 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 CCNYL1Q8N7R7 359 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 OR13C4Q8NGS5 318 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 MYRFLQ96LU7 910 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 PSKH2Q96QS6 385 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 EBF3Q9H4W6 596 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 WDR55Q9H6Y2 383 aaPredicted RBP22.66■■□□□ 1.22
LDB1-201ENST00000361198 VWA7Q9Y334 891 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 C2orf78A6NCI8 922 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 CLDN11O75508 207 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 PARNO95453 639 aaKnown RBP22.66■■□□□ 1.22
LDB1-201ENST00000361198 SOD2P04179 222 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 CCDC166P0CW27 439 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 IRF1P10914 325 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 PIM1P11309 404 aaPredicted RBP22.66■■□□□ 1.22
LDB1-201ENST00000361198 PLD1Q13393 1074 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 IKBKEQ14164 716 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 SLC14A2Q15849 920 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 TRIM60Q495X7 471 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 TECRLQ5HYJ1 363 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 SEL1L3Q68CR1 1132 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 TMCO2Q7Z6W1 182 aaPredicted RBP22.66■■□□□ 1.22
LDB1-201ENST00000361198 BBS5Q8N3I7 341 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 BRSK1Q8TDC3 778 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 ANKRD49Q8WVL7 239 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 VWCEQ96DN2 955 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 EXOC2Q96KP1 924 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 TRIB3Q96RU7 358 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 KLHL4Q9C0H6 718 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 UBA2Q9UBT2 640 aaPredicted RBP22.66■■□□□ 1.22
LDB1-201ENST00000361198 SEPT3Q9UH03 358 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 CRYL1Q9Y2S2 319 aa22.66■■□□□ 1.22
LDB1-201ENST00000361198 GRID2O43424 1007 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 KDELR3O43731 214 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 TSPAN3O60637 253 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 ZMPSTE24O75844 475 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 GOT2P00505 430 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 THRAP10827 490 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 KPNA2P52292 529 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 CDKN2DP55273 166 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 OXCT1P55809 520 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 SFT2D3Q587I9 215 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 SPOUT1Q5T280 376 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 SH3RF2Q8TEC5 729 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 UBXN10Q96LJ8 280 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 TUBGCP5Q96RT8 1024 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 CINPQ9BW66 212 aaPredicted RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 RETREG1Q9H6L5 497 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 AGO1Q9UL18 857 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 PRPF19Q9UMS4 504 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 MTF2Q9Y483 593 aaPredicted RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 YIPF1Q9Y548 306 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 COL4A6Q14031 1691 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 H3BNX3 289 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 NEMP1O14524 444 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms