RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MRPL57Q9BQC6 102 aaKnown RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 TMLHEQ9NVH6 421 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ARL8BQ9NVJ2 186 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 LRIG2O94898 1065 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 MAPTP10636 758 aaKnown RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 CTSKP43235 329 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 CLCN5P51795 746 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SMIM11AP58511 58 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 PCDH1Q08174 1060 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 PDK4Q16654 411 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 PTPRNQ16849 979 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 CRTC3Q6UUV7 619 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF615Q8N8J6 731 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SLC9A6Q92581 669 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SLC4A9Q96Q91 983 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SP140LQ9H930 580 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 XPR1Q9UBH6 696 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 RAPGEFL1Q9UHV5 662 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 TMCO1Q9UM00 188 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 RAP2CQ9Y3L5 183 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 SALL1Q9NSC2 1324 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 DDTLA6NHG4 134 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-203ENST00000359759 PRR5-ARHGAP8B1AHC4 643 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 METTL18O95568 372 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ITGA2BP08514 1039 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 IL1R1P14778 569 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ARFIP1P53367 373 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ARHGAP8P85298 464 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 GCNT1Q02742 428 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ITGA7Q13683 1181 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 DLG2Q15700 870 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 WSCD1Q658N2 575 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 GALNT18Q6P9A2 607 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ITGB1BP2Q9UKP3 347 aa16.07■□□□□ 0.16
COL18A1-203ENST00000359759 ISM1B1AKI9 464 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 CBFA2T3O75081 653 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 GOT1P17174 413 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ATF4P18848 351 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-203ENST00000359759 S100A1P23297 94 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 CBX5P45973 191 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MC1RQ01726 317 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ITPK1Q13572 414 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MPPE1Q53F39 396 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF248Q8NDW4 579 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 SETD6Q8TBK2 473 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MCMBPQ9BTE3 642 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 SNRNP25Q9BV90 132 aaKnown RBP16.06■□□□□ 0.16
COL18A1-203ENST00000359759 C1QTNF7Q9BXJ2 289 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 SLC17A7Q9P2U7 560 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ADAM28Q9UKQ2 775 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 UGT2B17O75795 530 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MNDAP41218 407 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MARCKSL1P49006 195 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 AP1S2P56377 157 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 GPR180Q86V85 440 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 HOMEZQ8IX15 550 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 GPR65Q8IYL9 337 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 FEM1CQ96JP0 617 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 LMAN2LQ9H0V9 348 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 PDP1Q9P0J1 537 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-203ENST00000359759 AMPD2Q01433 879 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 FAM151BQ6UXP7 276 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
COL18A1-203ENST00000359759 OR2L5Q8NG80 312 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ING5Q8WYH8 240 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 VAT1Q99536 393 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 PDCD2LQ9BRP1 358 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 EXD2Q9NVH0 621 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ITPKBP27987 946 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 TMEM119Q4V9L6 283 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 OTOP1Q7RTM1 612 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 TRPV1Q8NER1 839 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 RELTQ969Z4 430 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 DMRTB1Q96MA1 342 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 FAM240BA0A1B0GVZ2 78 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ALOX5P09917 674 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MYBL2P10244 700 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MXD1Q05195 221 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 LENG9Q96B70 501 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF607Q96SK3 696 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 MIR1-1HGQ9H1L0 117 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ATXN10Q9UBB4 475 aa16.06■□□□□ 0.16
COL18A1-203ENST00000359759 ALDH3A2P51648 485 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 RGS1Q08116 209 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 FSCN1Q16658 493 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 JAZF1Q86VZ6 243 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CD101Q93033 1021 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 WNT8BQ93098 351 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 UBE2E3Q969T4 207 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 PPP1R16AQ96I34 528 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 IKZF2Q9UKS7 526 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SNX7Q9UNH6 387 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 DHFRP00374 187 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 EIF4BP23588 611 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 AKT2P31751 481 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 FAUP35544 74 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms