RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 STK19P49842 368 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 SERPINH1P50454 418 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 KPNA1P52294 538 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CDH4P55283 916 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CDH18Q13634 790 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RASA2Q15283 850 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CYTH1Q15438 398 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CHI3L2Q15782 390 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LRRC73Q5JTD7 316 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PPM1LQ5SGD2 360 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RBM20Q5T481 1227 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 GPR158Q5T848 1215 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LILRA6Q6PI73 481 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CNSTQ6PJW8 725 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 ATG14Q6ZNE5 492 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 ADGRD2Q7Z7M1 963 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LINC00523Q86TU6 105 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CEP97Q8IW35 865 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CMTM8Q8IZV2 173 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 EFHBQ8N7U6 833 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MRPL43Q8N983 215 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PPHLN1Q8NEY8 458 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 OR13J1Q8NGT2 312 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 SHKBP1Q8TBC3 707 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MRPS31Q92665 395 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 HDAC10Q969S8 669 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PLD4Q96BZ4 506 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TMA16Q96EY4 203 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 IFT43Q96FT9 208 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 VPS39Q96JC1 886 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 DNAJC1Q96KC8 554 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RBBP8Q99708 897 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 KIFC1Q9BW19 673 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CINPQ9BW66 212 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 POLR1EQ9GZS1 481 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TNKS2Q9H2K2 1166 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LINC00597Q9H2U6 94 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MANSC1Q9H8J5 431 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RXFP1Q9HBX9 757 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 BPIFA1Q9NP55 256 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 DNMT3BQ9UBC3 853 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 UBA2Q9UBT2 640 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF180Q9UJW8 692 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TCAF1Q9Y4C2 921 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 SLC30A1Q9Y6M5 507 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 A0A0G2JND7 137 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 A0A1B0GVM2 712 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CCDC162PA2VCL2 907 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TCAF2A6NFQ2 919 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RFXAPO00287 272 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LEFTY2O00292 366 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MGRN1O60291 552 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 EFCAB14O75071 495 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 SMIM24O75264 130 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CLDN11O75508 207 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 GSTA2P09210 222 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MYCLP1P12525 358 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CTPS1P17812 591 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CCR10P46092 362 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CDKN1CP49918 316 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CLCN4P51793 760 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TUBA1BP68363 451 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MSLNQ13421 630 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 MAP7D1Q3KQU3 841 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LGSNQ5TDP6 509 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 KLHDC10Q6PID8 442 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 C6orf89Q6UWU4 347 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RAPH1Q70E73 1250 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TUBA1AQ71U36 451 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 GRASPQ7Z6J2 395 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 ITIH5Q86UX2 942 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PIM3Q86V86 326 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TMEM25Q86YD3 366 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TEX26Q8N6G2 289 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 NAT16Q8N8M0 369 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TDRD5Q8NAT2 981 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 LPCAT1Q8NF37 534 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 AGR3Q8TD06 166 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 OVCA2Q8WZ82 227 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 RMDN1Q96DB5 314 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 SGF29Q96ES7 293 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PRR11Q96HE9 360 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 NAF1Q96HR8 494 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TBATAQ96M53 351 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CDK5RAP1Q96SZ6 601 aaKnown RBP5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CPNE1Q99829 537 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 FEM1AQ9BSK4 669 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 NAT9Q9BTE0 207 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 SHCBP1LQ9BZQ2 653 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 FAM96AQ9H5X1 160 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 PPCSQ9HAB8 311 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 EBF2Q9HAK2 575 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 ASAH2Q9NR71 780 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 FNIP2Q9P278 1114 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 VPS51Q9UID3 782 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 TRIM33Q9UPN9 1127 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CARD8Q9Y2G2 431 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 CRYL1Q9Y2S2 319 aa5.11□□□□□ -1.59
ATXN3-202ENST00000359366 USP15Q9Y4E8 981 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms