RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ST13P5Q8NFI4 369 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 OR6K2Q8NGY2 324 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 BRSK1Q8TDC3 778 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 ZNF778Q96MU6 729 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 CPNE1Q99829 537 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 FAM167BQ9BTA0 163 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 TRABDQ9H4I3 376 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 DLL3Q9NYJ7 618 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 MROH6A6NGR9 719 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 ANKRD66B4E2M5 251 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 TRIM24O15164 1050 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 HTRA2O43464 458 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 TIMM44O43615 452 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 LDB2O43679 373 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 FZD6O60353 706 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 UGT1A9O60656 530 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 POP4O95707 220 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 PDHA1P08559 390 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 DLDP09622 509 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 BRAFP15056 766 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 ATP1A2P50993 1020 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 CCNHP51946 323 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 GYS2P54840 703 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 CSE1LP55060 971 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 ST8SIA6P61647 398 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 PRAMEP78395 509 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 THOC5Q13769 683 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 TAF1AQ15573 450 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 QPCTQ16769 361 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 HSP90AA5PQ58FG0 334 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 NUDT18Q6ZVK8 323 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 GLT6D1Q7Z4J2 308 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 CAMK1DQ8IU85 385 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 CALML6Q8TD86 181 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 MZB1Q8WU39 189 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 STYXQ8WUJ0 223 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 CYB5D2Q8WUJ1 264 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 MRGPRX3Q96LB0 322 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 SRPK1Q96SB4 655 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 SMC6Q96SB8 1091 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 CPEB1Q9BZB8 566 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 UGT1A7Q9HAW7 530 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 UGT1A10Q9HAW8 530 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 UGT1A8Q9HAW9 530 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 SLC2A6Q9UGQ3 507 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 SLCO3A1Q9UIG8 710 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 PCDHB9Q9Y5E1 797 aa13.9□□□□□ -0.18
PDLIM5-203ENST00000359265 A0A1W2PQ67 120 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 OTOL1A6NHN0 477 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 TRIM49D1C9J1S8 452 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC7A4O43246 635 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 BNIP3LO60238 219 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 FAM155BO75949 473 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 VAPBO95292 243 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 PIGNO95427 931 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 MT-ND3P03897 115 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 PRKCGP05129 697 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 GJA4P35212 333 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC6A11P48066 632 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 PDE1BQ01064 536 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 SMAD1Q15797 465 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 UGP2Q16851 508 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 TEDDM1Q5T9Z0 273 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 GRTP1Q5TC63 336 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 Q6ZVU0 165 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 CNTN4Q8IWV2 1026 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 NDUFAF2Q8N183 169 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 TERB1Q8NA31 727 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 UCMAQ8WVF2 138 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 DNASE1L2Q92874 299 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 ALKBH8Q96BT7 664 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 RBBP8Q99708 897 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 RPP25Q9BUL9 199 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 ZDHHC6Q9H6R6 413 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 KCNK12Q9HB15 430 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 TRPV5Q9NQA5 729 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 ELOVL2Q9NXB9 296 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 IL1RAPL1Q9NZN1 696 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC17A6Q9P2U8 582 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 SPO11Q9Y5K1 396 aa13.89□□□□□ -0.19
PDLIM5-203ENST00000359265 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 A6NNZ2 444 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 WASH3PC4AMC7 463 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 ARNTLO00327 626 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 TRAFD1O14545 582 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SIN3BO75182 1162 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 RPP40O75818 363 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 PIRTP0C851 137 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 LPOP22079 712 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 ARNTP27540 789 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 OPRD1P41143 372 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 ARCN1P48444 511 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms