RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CNPY1Q3B7I2 92 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 GPRIN1Q7Z2K8 1008 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ZC3HC1Q86WB0 502 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 HMCESQ96FZ2 354 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 CEP19Q96LK0 163 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 RNF145Q96MT1 663 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 PLEKHG4BQ96PX9 1271 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 OLA1Q9NTK5 396 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TUBA8Q9NY65 449 aaPredicted RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 CD3EAPO15446 510 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 IRAK2O43187 625 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 HLA-DQB2P05538 268 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 SLC2A4P14672 509 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 AOC1P19801 751 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ITGAXP20702 1163 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 ARHGEF7Q14155 803 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 NEDD8Q15843 81 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 PITRM1Q5JRX3 1037 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 AARS2Q5JTZ9 985 aaKnown RBP12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TIFABQ6ZNK6 161 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 DEFB128Q7Z7B8 93 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 DENND1CQ8IV53 801 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 FAM126BQ8IXS8 530 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 CDYL2Q8N8U2 506 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 TSPAN18Q96SJ8 248 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 NMRK2Q9NPI5 230 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 OXSMQ9NWU1 459 aa12.3□□□□□ -0.44
COL20A1-201ENST00000358894 SOCS7O14512 581 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ASGR1P07306 291 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 COL6A2P12110 1019 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 GM2AP17900 193 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 SERPINB1P30740 379 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 THOP1P52888 689 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 CHRNB3Q05901 458 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 GTF2H3Q13889 308 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 UGT3A1Q6NUS8 523 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ARRDC4Q8NCT1 418 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ADAMTS10Q9H324 1103 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ZDHHC2Q9UIJ5 367 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 CCDC154A6NI56 674 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 M0R3G1 203 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 AZIN1O14977 448 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 NRP2O60462 931 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 CCDC159P0C7I6 412 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ATP6V1B2P21281 511 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 NUP107P57740 925 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 DUSP4Q13115 394 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ITGADQ13349 1161 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 MYO1HQ8N1T3 1032 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 KCTD13Q8WZ19 329 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 DGCR14Q96DF8 476 aaKnown RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 CIB1Q99828 191 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 KIF17Q9P2E2 1029 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 TIMM22Q9Y584 194 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 EVPLQ92817 2033 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 CLOCKO15516 846 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 DLX3O60479 287 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 TIPRLO75663 272 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 FKBP9O95302 570 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ALOX15P16050 662 aaPredicted RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 XRCC1P18887 633 aaPredicted RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ATP5C1P36542 298 aaKnown RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 C21orf59P57076 290 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 C6orf52Q5T4I8 152 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 FKBP9P1Q75LS8 142 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ADCK1Q86TW2 530 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 LRRC49Q8IUZ0 686 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 CLYBLQ8N0X4 340 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ENDOVQ8N8Q3 282 aaKnown RBP12.29□□□□□ -0.44
COL20A1-201ENST00000358894 NSMCE2Q96MF7 247 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 DHRS4Q9BTZ2 278 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 STK39Q9UEW8 545 aa12.29□□□□□ -0.44
COL20A1-201ENST00000358894 DHRS4L1P0CG22 281 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ELNP15502 786 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 MTX3Q5HYI7 312 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 RBM20Q5T481 1227 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 IL27RAQ6UWB1 636 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 TMC5Q6UXY8 1006 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 SZRD1Q7Z422 152 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 PGAM4Q8N0Y7 254 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 RTL3Q8N8U3 475 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 OR4L1Q8NH43 312 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 LPGAT1Q92604 370 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ESAMQ96AP7 390 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 TUBGCP5Q96RT8 1024 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 HBEGFQ99075 208 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ASPSCR1Q9BZE9 553 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 SLC25A51Q9H1U9 297 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms