RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HACD3Q9P035 362 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ANAPC2Q9UJX6 822 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 NOD1Q9Y239 953 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 RNF11Q9Y3C5 154 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 KCTD3Q9Y597 815 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 NME7Q9Y5B8 376 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 ORC6Q9Y5N6 252 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 RAD54BQ9Y620 910 aa6.59□□□□□ -1.35
CSDE1-203ENST00000358528 COL2A1P02458 1487 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-203ENST00000358528 H3BNH8 94 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 TMX2-CTNND1H3BSU7 103 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 M0R3G1 203 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 PPP6CO00743 305 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 SYNCRIPO60506 623 aaKnown RBP6.59□□□□□ -1.36
CSDE1-203ENST00000358528 GLP2RO95838 553 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 LBPP18428 481 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 ITGB6P18564 788 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 UGT1A1P22309 533 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 UGT1A4P22310 534 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 UGT1A3P35503 534 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 UGT1A5P35504 534 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 SERPINH1P50454 418 aaKnown RBP6.59□□□□□ -1.36
CSDE1-203ENST00000358528 CDK9P50750 372 aaKnown RBP6.59□□□□□ -1.36
CSDE1-203ENST00000358528 DAOAP59103 153 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 BEX3Q00994 111 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 POU4F1Q01851 419 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 MERTKQ12866 999 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 GTF2H3Q13889 308 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 GALNT3Q14435 633 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 ATP6AP1LQ52LC2 224 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 MARC1Q5VT66 337 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 EGFLAMQ63HQ2 1017 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 MILR1Q7Z6M3 343 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 SPATA2LQ8IUW3 424 aaPredicted RBP6.59□□□□□ -1.36
CSDE1-203ENST00000358528 FBXO39Q8N4B4 442 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 CDYL2Q8N8U2 506 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 TWIST2Q8WVJ9 160 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 ISOC1Q96CN7 298 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 EXOC2Q96KP1 924 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 EGFL8Q99944 293 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 KLHL25Q9H0H3 589 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 FANCEQ9HB96 536 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 ENTPD7Q9NQZ7 604 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 EXD2Q9NVH0 621 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 SMOXQ9NWM0 555 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 AFF4Q9UHB7 1163 aaKnown RBP6.59□□□□□ -1.36
CSDE1-203ENST00000358528 FBXW11Q9UKB1 542 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 SH3GLB1Q9Y371 365 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 TCAF1Q9Y4C2 921 aa6.59□□□□□ -1.36
CSDE1-203ENST00000358528 PRSS51A0A1B0GVH4 220 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CFAP99D6REC4 459 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 BTN3A1O00481 513 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 AZIN1O14977 448 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 BNIP3LO60238 219 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ONECUT3O60422 494 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PAGE1O75459 146 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 MAGP20916 626 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GABRB3P28472 473 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 BRCC3P46736 316 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SCNN1GP51170 649 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 DSC2Q02487 901 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CHRNB3Q05901 458 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PAFAH1B3Q15102 231 aaKnown RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CYS1Q717R9 158 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 LSMEM2Q8N112 164 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF555Q8NEP9 628 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GPR152Q8TDT2 470 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GLMNQ92990 594 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 FAM162AQ96A26 154 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 NSUN5Q96P11 429 aaKnown RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 RPRD1AQ96P16 312 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SLC39A8Q9C0K1 460 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 VRTNQ9H8Y1 702 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 RBPJLQ9UBG7 517 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 FAM8A1Q9UBU6 413 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PGAP2Q9UHJ9 254 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 BAG5Q9UL15 447 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 NFKBIEO00221 500 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 DCLK1O15075 740 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 B4GAT1O43505 415 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 HS6ST1O60243 411 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 TBC1D4O60343 1298 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GUCA1CO95843 209 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 HLA-DQB2P05538 268 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SLC2A3P11169 496 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 IGFBP6P24592 240 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PIK3CGP48736 1102 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 RAD23AP54725 363 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF280AP59817 542 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 TSPY1Q01534 308 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PIGFQ07326 219 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ARHGAP1Q07960 439 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GRB7Q14451 532 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 NR6A1Q15406 480 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 FGD3Q5JSP0 725 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ADCK1Q86TW2 530 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CLYBLQ8N0X4 340 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms