RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 NEK6Q9HC98 313 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 WDR6Q9NNW5 1121 aaKnown RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 ARMC1Q9NVT9 282 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 RBAKQ9NYW8 714 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 SIRPGQ9P1W8 387 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 IP6K2Q9UHH9 426 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PTBP2Q9UKA9 531 aaKnown RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 ARHGAP26Q9UNA1 814 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PLLPQ9Y342 182 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 SPEF1Q9Y4P9 236 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 IKBKGQ9Y6K9 419 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PLXNA3P51805 1871 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CITO14578 2027 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GOLGA8QA0A0J9YX86 632 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GOLGA8IPA6NC78 632 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GOLGA8OA6NCC3 632 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ZBTB42B2RXF5 422 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GOLGA8NF8WBI6 632 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 H7C0C1 242 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 NOL3O60936 208 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ARIH2O95376 493 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 COX4I1P13073 169 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 XRCC1P18887 633 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 NCF2P19878 526 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 TYMPP19971 482 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 M6PRP20645 277 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 WARSP23381 471 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ITGB8P26012 769 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 L1CAMP32004 1257 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 COPZ1P61923 177 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GAD2Q05329 585 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KCNA1Q09470 495 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 HSPA14Q0VDF9 509 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 FAAP100Q0VG06 881 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ELAVL2Q12926 359 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 PPIGQ13427 754 aaKnown RBP eCLIP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 MTM1Q13496 603 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CUL2Q13617 745 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ZNF846Q147U1 533 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 HIF1AQ16665 826 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 FNBP1LQ5T0N5 605 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 RNASEH2BQ5TBB1 312 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 UGT3A1Q6NUS8 523 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ZCCHC23Q6ZST2 131 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 PCGF5Q86SE9 256 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 RNF180Q86T96 592 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 SLC51BQ86UW2 128 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 PALM2Q8IXS6 379 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 PHTF2Q8N3S3 785 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CYP2W1Q8TAV3 490 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 PIWIL2Q8TC59 973 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GIMAP1Q8WWP7 306 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 FATE1Q969F0 183 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GJA10Q969M2 543 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KLHL32Q96NJ5 620 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 VPS35Q96QK1 796 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CDRT15Q96T59 188 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 SERPINI1Q99574 410 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CLSTN3Q9BQT9 956 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 TMEM175Q9BSA9 504 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ANKRD60Q9BZ19 345 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 POLR1BQ9H9Y6 1135 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 C12orf10Q9HB07 376 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 PARVAQ9NVD7 372 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 WRAP73Q9P2S5 460 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 ZMYM5Q9UJ78 669 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 NOCTQ9UK39 431 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KAT6AQ92794 2004 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 BRCA2P51587 3418 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 AIM2O14862 343 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 HAT1O14929 419 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 AURKAO14965 403 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 SLC22A1O15245 554 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 SLC16A4O15374 487 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 TLR3O15455 904 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 HTRA2O43464 458 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 DCXO43602 365 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CHMP2AO43633 222 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 IDH3BO43837 385 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 TSPAN1O60635 241 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 SEC24DO94855 1032 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CSPG5O95196 566 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 FKBP9O95302 570 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KRT6AP02538 564 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KRT6BP04259 564 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 POU2F2P09086 479 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GNAO1P09471 354 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CLTBP09497 229 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KRT3P12035 628 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CDH1P12830 882 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 DARSP14868 501 aaKnown RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 NAGAP17050 411 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CTRB1P17538 263 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 POLR2CP19387 275 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 MATN1P21941 496 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CES1P23141 567 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 CCND3P30281 292 aaPredicted RBP4.01□□□□□ -1.77
CNGA1-201ENST00000358519 KCNQ1P51787 676 aa4.01□□□□□ -1.77
CNGA1-201ENST00000358519 GRSF1Q12849 480 aaKnown RBP eCLIP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms