RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ATP5C1P36542 298 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 GARSP41250 739 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 THOP1P52888 689 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 NTHL1P78549 312 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 USP4Q13107 963 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 RFTN1Q14699 578 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 HECTD3Q5T447 861 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 NAPRTQ6XQN6 538 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 BNC2Q6ZN30 1099 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 GAREM2Q75VX8 874 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 ITIH5Q86UX2 942 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 DSELQ8IZU8 1212 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 PGAM4Q8N0Y7 254 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 TMEM102Q8N9M5 508 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 MYRFLQ96LU7 910 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 OR52B2Q96RD2 323 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 ATXN3LQ9H3M9 355 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 TCF7L2Q9NQB0 619 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 SNX15Q9NRS6 342 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 OR12D3Q9UGF7 316 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 CEPT1Q9Y6K0 416 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 COL4A4P53420 1690 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
RTFDC1-202ENST00000357348 A0A0J9YVX5 310 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 E9PBE3 544 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 MATN2O00339 956 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 KLHL41O60662 606 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 BCAS2O75934 225 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 ARL4AP40617 200 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 CDKL1Q00532 357 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 EIF4EBP2Q13542 120 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 HEATR6Q6AI08 1181 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 BEND5Q7L4P6 421 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 ARL14EPQ8N8R7 260 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 PDZD8Q8NEN9 1154 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 HTR3CQ8WXA8 447 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 GRIP2Q9C0E4 1043 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 IL21Q9HBE4 155 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 COMMD8Q9NX08 183 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 DTLQ9NZJ0 730 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 THEGQ9P2T0 379 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 EEF2KO00418 725 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 ACOT8O14734 319 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 HSPA4LO95757 839 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 F11P03951 625 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 XRCC1P18887 633 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 MGAT1P26572 445 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 SLC5A2P31639 672 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 CCR2P41597 374 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 CSRP3P50461 194 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 CEACAM7Q14002 265 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 CYLC2Q14093 348 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 FLOT2Q14254 428 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 SPANXN3Q5MJ09 141 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 RWDD4Q6NW29 188 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 CHERPQ8IWX8 916 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 TCEAL4Q96EI5 215 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 DNAJC1Q96KC8 554 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 FCRL2Q96LA5 508 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 RBBP8Q99708 897 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 SMG9Q9H0W8 520 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 TLR6Q9Y2C9 796 aa12.74□□□□□ -0.37
RTFDC1-202ENST00000357348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 ZSCAN9O15535 394 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TRIM13O60858 407 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MPOP05164 745 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CD1EP15812 388 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 ALDH3B2P48448 385 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 SERPINB8P50452 374 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 NUDT2P50583 147 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 LIMK2P53671 638 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MRPS22P82650 360 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TXNL4AP83876 142 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MS4A2Q01362 244 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MSANTD2Q6P1R3 559 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TMC5Q6UXY8 1006 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TMC8Q8IU68 726 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 PLD6Q8N2A8 252 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 DCLK2Q8N568 766 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TDRD5Q8NAT2 981 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 GFM2Q969S9 779 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 WBP2Q969T9 261 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CERS2Q96G23 380 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 PKP2Q99959 881 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 OLA1Q9NTK5 396 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 ARHGEF38Q9NXL2 777 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 UXTQ9UBK9 157 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 DNMT3LQ9UJW3 386 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 HS3ST4Q9Y661 456 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 SHROOM3Q8TF72 1996 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 NOTCH4Q99466 2003 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 LRIG2O94898 1065 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms