RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ACVRL1P37023 503 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 SUOXP51687 545 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 ACLYP53396 1101 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 STX5Q13190 355 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 ADGRE1Q14246 886 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 RASIP1Q5U651 963 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 ICA1LQ8NDH6 482 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 BHLHE22Q8NFJ8 381 aaPredicted RBP22.18■■□□□ 1.14
UPF3A-201ENST00000351487 SPATA17Q96L03 361 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 SARDHQ9UL12 918 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 STX16-NPEPL1H3BU86 382 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 MUSKO15146 869 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 GRM2Q14416 872 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 FAM171A1Q5VUB5 890 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 NADSYN1Q6IA69 706 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 RPS27LQ71UM5 84 aaKnown RBP22.18■■□□□ 1.14
UPF3A-201ENST00000351487 PIM3Q86V86 326 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 TMA16Q96EY4 203 aaKnown RBP22.18■■□□□ 1.14
UPF3A-201ENST00000351487 ZNF599Q96NL3 588 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 POPDC3Q9HBV1 291 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 COMMD8Q9NX08 183 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 TRAF6Q9Y4K3 522 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 PCDHGA7Q9Y5G6 932 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 TLL2Q9Y6L7 1015 aa22.18■■□□□ 1.14
UPF3A-201ENST00000351487 MOXD2PA6NHM9 499 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 TMEM88BA6NKF7 163 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 TRIM38O00635 465 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 UBFD1O14562 309 aaKnown RBP22.17■■□□□ 1.14
UPF3A-201ENST00000351487 SOAT2O75908 522 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 GLP2RO95838 553 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 GOT2P00505 430 aaKnown RBP22.17■■□□□ 1.14
UPF3A-201ENST00000351487 KCNC1P48547 511 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 HERVK_113P63132 956 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 FASTKQ14296 549 aaKnown RBP22.17■■□□□ 1.14
UPF3A-201ENST00000351487 ZNF235Q14590 738 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 MMEL1Q495T6 779 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 RARS2Q5T160 578 aaKnown RBP22.17■■□□□ 1.14
UPF3A-201ENST00000351487 ZNF549Q6P9A3 640 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 PTERQ96BW5 349 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 TSC22D3Q99576 134 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 ERVK-6Q9BXR3 956 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
UPF3A-201ENST00000351487 POLR3BQ9NW08 1133 aaPredicted RBP22.17■■□□□ 1.14
UPF3A-201ENST00000351487 PRSS51A0A1B0GVH4 220 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 MTMR11A4FU01 709 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 SMIM24O75264 130 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 GJB3O75712 270 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 RPP40O75818 363 aaKnown RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 FESP07332 822 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 HMBSP08397 361 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 ZDHHC11BP0C7U3 371 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CD1DP15813 335 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 OGNP20774 298 aaKnown RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 PEX19P40855 299 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 PPP1R3AQ16821 1122 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 MRNIPQ6NTE8 343 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CYHR1Q6ZMK1 362 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 RNF180Q86T96 592 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 BRSK1Q8TDC3 778 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 SH3RF2Q8TEC5 729 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 ASB9Q96DX5 294 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 MYEOVQ96EZ4 313 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 DCUN1D1Q96GG9 259 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 DNAJC1Q96KC8 554 aaKnown RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 TRPC7Q9HCX4 862 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 MRPL40Q9NQ50 206 aaKnown RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 TMEM161AQ9NX61 479 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CACNA2D2Q9NY47 1150 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 SUCOQ9UBS9 1254 aaKnown RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CRYL1Q9Y2S2 319 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 MTF2Q9Y483 593 aaPredicted RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 GBF1Q92538 1859 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 PSMD12O00232 456 aaPredicted RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CD3EAPO15446 510 aaKnown RBP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CAPNS1P04632 268 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 COL6A1P12109 1028 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 FGFR3P22607 806 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 PSME3P61289 254 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 TIAL1Q01085 375 aaKnown RBP eCLIP22.16■■□□□ 1.14
UPF3A-201ENST00000351487 LRP8Q14114 963 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 C5orf22Q49AR2 442 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 UNC50Q53HI1 259 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 TICAM1Q8IUC6 712 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 RNF148Q8N7C7 305 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CATSPER1Q8NEC5 780 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 BLOC1S5Q8TDH9 187 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 LRGUKQ96M69 825 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 UNC93B1Q9H1C4 597 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 ARL5AQ9Y689 179 aa22.16■■□□□ 1.14
UPF3A-201ENST00000351487 CAPN8A6NHC0 703 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ELNP15502 786 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ZNF37AP17032 561 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-201ENST00000351487 TACR2P21452 398 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 MSX2P35548 267 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-201ENST00000351487 ATP4BP51164 291 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 KPNA1P52294 538 aaPredicted RBP22.15■■□□□ 1.14
UPF3A-201ENST00000351487 GPR17Q13304 367 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 LARP4Q71RC2 724 aaKnown RBP eCLIP22.15■■□□□ 1.14
UPF3A-201ENST00000351487 PIP4K2CQ8TBX8 421 aa22.15■■□□□ 1.14
UPF3A-201ENST00000351487 GBP5Q96PP8 586 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms