RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 UBXN10Q96LJ8 280 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 C19orf43Q9BQ61 176 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TCF25Q9BQ70 676 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 MRPL57Q9BQC6 102 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ZBED2Q9BTP6 218 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TUBB6Q9BUF5 446 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 WWP1Q9H0M0 922 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LRMDAQ9H2I8 198 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 FAM96AQ9H5X1 160 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TLE6Q9H808 572 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ASAH2Q9NR71 780 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 DNAJC28Q9NX36 388 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 HACD3Q9P035 362 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 KIAA1522Q9P206 1035 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LNPEPQ9UIQ6 1025 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ZFP69BQ9UJL9 534 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 INTS6Q9UL03 887 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CLEC4EQ9ULY5 219 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 RUVBL2Q9Y230 463 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 DNAJC16Q9Y2G8 782 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 VWA7Q9Y334 891 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 SH3BP1Q9Y3L3 701 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 RAI2Q9Y5P3 530 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CACNA1BQ00975 2339 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LINC01553A4QN01 128 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CAPN14A8MX76 684 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ANKRD66B4E2M5 251 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 H7C0S8 307 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 TK2O00142 265 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 FCHO1O14526 889 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SCAMP3O14828 347 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CD3EAPO15446 510 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CCL16O15467 120 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MGRN1O60291 552 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CCDC22O60826 627 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF821O75541 412 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PGLSO95336 258 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PAPLNO95428 1278 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 GLP2RO95838 553 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MT-CO1P00395 513 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PENKP01210 267 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RB1P06400 928 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CKMP06732 381 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SERPINA6P08185 405 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 HNRNPA1P09651 372 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LTA4HP09960 611 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PIRTP0C851 137 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MYL4P12829 197 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 GJA1P17302 382 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 EN2P19622 333 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CD9P21926 228 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LPOP22079 712 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SERPINB3P29508 390 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CTNNB1P35222 781 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 AVPR1AP37288 418 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 NUMBP49757 651 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 KPNA2P52292 529 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 HK2P52789 917 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 STC1P52823 247 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 AQP5P55064 265 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CDKN2DP55273 166 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RPL26P61254 145 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RHOAP61586 193 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 KCNJ2P63252 427 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ELF3P78545 371 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PFKPQ01813 784 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SLC20A2Q08357 652 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LMAN2Q12907 356 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RIPK1Q13546 671 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CDH18Q13634 790 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF460Q14592 562 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PLEKHG6Q3KR16 790 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PRSS36Q5K4E3 855 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LIPMQ5VYY2 423 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 FBXW10Q5XX13 1052 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 FAM45BPQ6NSW5 357 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MRNIPQ6NTE8 343 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RETSATQ6NUM9 610 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 AFTPHQ6ULP2 937 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 TMEM207Q6UWW9 146 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 METTL3Q86U44 580 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LDB1Q86U70 411 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RNF135Q8IUD6 432 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 WDR75Q8IWA0 830 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MFN1Q8IWA4 741 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LEMD2Q8NC56 503 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 LPCAT1Q8NF37 534 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 OR6P1Q8NGX9 317 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 OR4L1Q8NH43 312 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RIN3Q8TB24 985 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 FAM45AQ8TCE6 357 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SH3RF2Q8TEC5 729 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PDCD6IPQ8WUM4 868 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 HEXDCQ8WVB3 486 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PIH1D2Q8WWB5 315 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 USP13Q92995 863 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms