RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLX4Q8IY92 1834 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 PTGES3LE9PB15 166 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PRKCBP05771 671 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ITGB6P18564 788 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SOX11P35716 441 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 NDST1P52848 882 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 MPP1Q00013 466 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 RAD51Q06609 339 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF181Q2M3W8 571 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TBC1D10BQ4KMP7 808 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PRR16Q569H4 304 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GLRA4Q5JXX5 417 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 OTUD3Q5T2D3 398 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 LINC00518Q8N0U6 118 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 CERS5Q8N5B7 392 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PAF1Q8N7H5 531 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ANKRD53Q8N9V6 530 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 URGCPQ8TCY9 931 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SLC22A17Q8WUG5 538 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ST8SIA2Q92186 375 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 MUL1Q969V5 352 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 MCRS1Q96EZ8 462 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ASIC4Q96FT7 647 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TMEM80Q96HE8 168 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SLIRPQ9GZT3 109 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 UNC93B1Q9H1C4 597 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 UPF3AQ9H1J1 476 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TOPORSQ9NS56 1045 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TMLHEQ9NVH6 421 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GGA3Q9NZ52 723 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 EGFL7Q9UHF1 273 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 WBP11Q9Y2W2 641 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PTPRFP10586 1907 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 NRP2O60462 931 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GLRA3O75311 464 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PDGFAP04085 211 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 F7P08709 466 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 KRT7P08729 469 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 IL1R1P14778 569 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ATF6P18850 670 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 POU3F3P20264 500 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 IMPDH1P20839 514 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF252P-AS1Q0IIN9 211 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 NFIL3Q16649 462 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TYSND1Q2T9J0 566 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ODR4Q5SWX8 454 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TBPL2Q6SJ96 375 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 DPY19L3Q6ZPD9 716 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 STRADAQ7RTN6 431 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 MPP5Q8N3R9 675 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SVOPQ8N4V2 548 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PHF10Q8WUB8 498 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PPP1R13LQ8WUF5 828 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 RPL3LQ92901 407 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 HDAC10Q969S8 669 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 REXO5Q96IC2 774 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GAD1Q99259 594 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 IER2Q9BTL4 223 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 YTHDF1Q9BYJ9 559 aaKnown RBP10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SLC35C2Q9NQQ7 365 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 RAB6BQ9NRW1 208 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SYBUQ9NX95 663 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GLTPQ9NZD2 209 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SNX7Q9UNH6 387 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 SNX6Q9UNH7 406 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 DDCP20711 480 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 FASP25445 335 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 DDOSTP39656 456 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 TXNDC11Q6PKC3 985 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 WDR49Q8IV35 697 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GALNT11Q8NCW6 608 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 OR4M2Q8NGB6 313 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 MCFD2Q8NI22 146 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 LRRN4Q8WUT4 740 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF385DQ9H6B1 395 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 ZC4H2Q9NQZ6 224 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 PCSK1NQ9UHG2 260 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 FBXO5Q9UKT4 447 aa10.68□□□□□ -0.7
CAPN3-203ENST00000349748 GAKO14976 1311 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 COL11A2P13942 1736 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 DHRS12A0PJE2 317 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 AKR7A2O43488 359 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 GABARAPO95166 117 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 YES1P07947 543 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 CYP2A6P11509 494 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF76P36508 570 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 HAAOP46952 286 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 ST13P50502 369 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SLC7A2P52569 658 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 MAPK12P53778 367 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 ADARB1P78563 741 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF33BQ06732 778 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 DGCR6Q14129 220 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 KCNJ11Q14654 390 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF600Q6ZNG1 722 aa10.67□□□□□ -0.7
CAPN3-203ENST00000349748 C15orf52Q6ZUT6 534 aaKnown RBP10.67□□□□□ -0.7
CAPN3-203ENST00000349748 SPRED1Q7Z699 444 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms