RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RMDN1Q96DB5 314 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 SGF29Q96ES7 293 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 EXOC2Q96KP1 924 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 TDRD1Q9BXT4 1180 aaKnown RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 CATSPERZQ9NTU4 200 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 NLE1Q9NVX2 485 aaPredicted RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 CRYL1Q9Y2S2 319 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 GRID2O43424 1007 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 PRLP01236 227 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 ZNF140P52738 457 aaPredicted RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 ARF5P84085 180 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 TRIM67Q6ZTA4 783 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 ANKRD49Q8WVL7 239 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 CMTM5Q96DZ9 223 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 CDKN2AIPNLQ96HQ2 116 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 CNDP1Q96KN2 507 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 OR52B2Q96RD2 323 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 SLC22A12Q96S37 553 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 ZNF334Q9HCZ1 680 aaPredicted RBP20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 SPO11Q9Y5K1 396 aa20.41■□□□□ 0.86
CHRNA3-202ENST00000348639 E9PBE3 544 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 KLHL41O60662 606 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 TM7SF2O76062 418 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 TPBGLP0DKB5 382 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 FDXRP22570 491 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 CPOXP36551 454 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 GJA8P48165 433 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 COPAP53621 1224 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 MXRA7P84157 204 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 TAF1AQ15573 450 aaPredicted RBP20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 TMEM207Q6UWW9 146 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 SDCCAG8Q86SQ7 713 aaPredicted RBP20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 ITIH5Q86UX2 942 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 DCLRE1BQ9H816 532 aa20.4■□□□□ 0.86
CHRNA3-202ENST00000348639 DCXO43602 365 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 IPO13O94829 963 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 CD160O95971 181 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 PSMA3P25788 255 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 PRDX6P30041 224 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 SEMA3AQ14563 771 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 KPNB1Q14974 876 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 TYSND1Q2T9J0 566 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 KHDC1Q4VXA5 237 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 PABPC1LQ4VXU2 614 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 ZNF549Q6P9A3 640 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 PHTF2Q8N3S3 785 aa20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-202ENST00000348639 NEMP2A6NFY4 417 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 H0Y626 953 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 ZBTB14O43829 449 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 GREM1O60565 184 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 TBL1XO60907 577 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 ZMPSTE24O75844 475 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 OLFM2O95897 454 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 STC1P52823 247 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 TXNDC8Q6A555 127 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 GLT6D1Q7Z4J2 308 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 SCUBE1Q8IWY4 988 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 GPR65Q8IYL9 337 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 ARL14EPQ8N8R7 260 aaPredicted RBP20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 ADAMTS19Q8TE59 1207 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 WDR55Q9H6Y2 383 aaPredicted RBP20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 IL21Q9HBE4 155 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 RAI2Q9Y5P3 530 aa20.39■□□□□ 0.85
CHRNA3-202ENST00000348639 A8MT66 165 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 GFRA2O00451 464 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 TMCC1O94876 653 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 SUOXP51687 545 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 NAA25Q14CX7 972 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 INO80DQ53TQ3 878 aaPredicted RBP20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 GPR158Q5T848 1215 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 Q6ZNB5 142 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 PIM3Q86V86 326 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 SLC22A9Q8IVM8 553 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 SPNS2Q8IVW8 549 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 CARNMT1Q8N4J0 409 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 TMEM199Q8N511 208 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 POU5F2Q8N7G0 328 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 KDM1BQ8NB78 822 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 HJURPQ8NCD3 748 aaPredicted RBP20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 MDGA1Q8NFP4 955 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 WDR60Q8WVS4 1066 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 FAM161BQ96MY7 647 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 NUF2Q9BZD4 464 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 SHCBP1LQ9BZQ2 653 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 POPDC3Q9HBV1 291 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 INTS10Q9NVR2 710 aaKnown RBP20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 PCDHGC4Q9Y5F7 938 aa20.38■□□□□ 0.85
CHRNA3-202ENST00000348639 C2orf81A6NN90 581 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ZBBXA8MT70 800 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 SNAP91O60641 907 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 EFCAB14O75071 495 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 PDHA1P08559 390 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 GNAZP19086 355 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 HDCP19113 662 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 KCNA5P22460 613 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 PMLP29590 882 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 PPM1AP35813 382 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 CCNG1P51959 295 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms