RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SPATA31C2B4DYI2 1134 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 RPL22P35268 128 aaKnown RBP23.15■■□□□ 1.3
NPAS3-201ENST00000346562 CXCR3P49682 368 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 EIF2B2P49770 351 aaKnown RBP23.15■■□□□ 1.3
NPAS3-201ENST00000346562 POLNQ7Z5Q5 900 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 HIPK1Q86Z02 1210 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 AP3S1Q92572 193 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 COQ7Q99807 217 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 CFAP97Q9P2B7 532 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 BTBD3Q9Y2F9 522 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 UBE2R2Q712K3 238 aaPredicted RBP23.15■■□□□ 1.3
NPAS3-201ENST00000346562 MON1AQ86VX9 555 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 EIF1ADQ8N9N8 165 aaKnown RBP23.15■■□□□ 1.3
NPAS3-201ENST00000346562 ZNF540Q8NDQ6 660 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 GRIP2Q9C0E4 1043 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 SNAP47Q5SQN1 464 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 SDHAF4Q5VUM1 108 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 DNAJB14Q8TBM8 379 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 CLP1Q92989 425 aaKnown RBP23.15■■□□□ 1.3
NPAS3-201ENST00000346562 MYOCQ99972 504 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 IMP3Q9NV31 184 aaKnown RBP23.15■■□□□ 1.3
NPAS3-201ENST00000346562 FGBP02675 491 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 MAPK10P53779 464 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 C17orf64Q86WR6 236 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 FAM71AQ8IYT1 594 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 MAB21L3Q8N8X9 362 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
NPAS3-201ENST00000346562 HOXB6P17509 224 aaKnown RBP23.14■■□□□ 1.3
NPAS3-201ENST00000346562 NRF1Q16656 503 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 GPR158Q5T848 1215 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 ABRAXAS1Q6UWZ7 409 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 SLC47A1Q96FL8 570 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 ZNF184Q99676 751 aaPredicted RBP23.14■■□□□ 1.3
NPAS3-201ENST00000346562 TMEM138Q9NPI0 162 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 SLC35C2Q9NQQ7 365 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 PCYOX1Q9UHG3 505 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.14■■□□□ 1.3
NPAS3-201ENST00000346562 RFXANKO14593 260 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 AZIN1O14977 448 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 CST1P01037 141 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 GIMD1P0DJR0 217 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 TTC27Q6P3X3 843 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 PYDC1Q8WXC3 89 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 ZNF304Q9HCX3 659 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 ASTN1O14525 1302 aa23.14■■□□□ 1.3
NPAS3-201ENST00000346562 ELP6Q0PNE2 266 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 ALKBH2Q6NS38 261 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 GET4Q7L5D6 327 aaPredicted RBP23.14■■□□□ 1.29
NPAS3-201ENST00000346562 SLC6A2P23975 617 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 ATP13A4Q4VNC1 1196 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 C12orf50Q8NA57 414 aaPredicted RBP23.14■■□□□ 1.29
NPAS3-201ENST00000346562 AIF1LQ9BQI0 150 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 FAM105AQ9NUU6 356 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 IDH3BO43837 385 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 CLDN11O75508 207 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 CDH24Q86UP0 819 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 OR7A2PQ8NGA2 310 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 PPTC7Q8NI37 304 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 WDR18Q9BV38 432 aa23.14■■□□□ 1.29
NPAS3-201ENST00000346562 RGSL1A5PLK6 1076 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SNAP91O60641 907 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 ITPKBP27987 946 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 MAXP61244 160 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 PLA2G4EQ3MJ16 856 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 IRGCQ6NXR0 463 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SPPL2BQ8TCT7 592 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 EPB41L1Q9H4G0 881 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 PRDM12Q9H4Q4 367 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.13■■□□□ 1.29
NPAS3-201ENST00000346562 PYDC2Q56P42 97 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SPESP1Q6UW49 350 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 ARHGAP36Q6ZRI8 547 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 JAZF1Q86VZ6 243 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 FBXO22Q8NEZ5 403 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 TLE6Q9H808 572 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SGK2Q9HBY8 427 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 TAS2R14Q9NYV8 317 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 RWDD3Q9Y3V2 267 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SUV39H1O43463 412 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SSNA1O43805 119 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 TNFRSF8P28908 595 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 PEX5LQ8IYB4 626 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 AMER2Q8N7J2 671 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 EXOC2Q96KP1 924 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 GULP1Q9UBP9 304 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 TRPS1Q9UHF7 1281 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 FAM237BA0A1B0GVD1 139 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 BTNL10A8MVZ5 291 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 NFATC1O95644 943 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 CHRNGP07510 517 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 ITGA2BP08514 1039 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 LINC00032P0C843 101 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 ARHGDIBP52566 201 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 RAPSNQ13702 412 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 CKAP2Q8WWK9 683 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 ZBTB10Q96DT7 871 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 EBNA1BP2Q99848 306 aaKnown RBP23.13■■□□□ 1.29
NPAS3-201ENST00000346562 DDX18Q9NVP1 670 aaKnown RBP23.13■■□□□ 1.29
NPAS3-201ENST00000346562 STX16-NPEPL1H3BU86 382 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 STX16O14662 325 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms