RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SYDE1Q6ZW31 735 aaPredicted RBP13.89□□□□□ -0.19
TPM4-202ENST00000344824 PTAR1Q7Z6K3 402 aaPredicted RBP13.89□□□□□ -0.19
TPM4-202ENST00000344824 SRLQ86TD4 932 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 TTC7BQ86TV6 843 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 NAXDQ8IW45 347 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 CXorf40AQ8TE69 158 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 SLCO2A1Q92959 643 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 FEM1CQ96JP0 617 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 CAMK1GQ96NX5 476 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 AGAP3Q96P47 875 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 TSGA13Q96PP4 275 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 RAB17Q9H0T7 212 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 ANKZF1Q9H8Y5 726 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 PCDH9Q9HC56 1237 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 GDF3Q9NR23 364 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 SNX24Q9Y343 169 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 PCDHB9Q9Y5E1 797 aa13.89□□□□□ -0.19
TPM4-202ENST00000344824 SPAARA0A1B0GVQ0 90 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 A0A1W2PR77 199 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 TTC24A2A3L6 582 aaPredicted RBP13.88□□□□□ -0.19
TPM4-202ENST00000344824 MATN3O15232 486 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 GJB3O75712 270 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 PRKCGP05129 697 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 THEGLP0DJG4 465 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 CD59P13987 128 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 CSRP1P21291 193 aaKnown RBP13.88□□□□□ -0.19
TPM4-202ENST00000344824 HNRNPA2B1P22626 353 aaKnown RBP13.88□□□□□ -0.19
TPM4-202ENST00000344824 SERPINA4P29622 427 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 NUDT1P36639 197 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 CTSKP43235 329 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 RENBPP51606 427 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 CLDN2P57739 230 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 MAXP61244 160 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 RPS21P63220 83 aaKnown RBP13.88□□□□□ -0.19
TPM4-202ENST00000344824 TUBB4BP68371 445 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 FOXK2Q01167 660 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 BCL2L1Q07817 233 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 SLC10A7Q0GE19 358 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 WASHC5Q12768 1159 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 TRADDQ15628 312 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 PID1Q7Z2X4 250 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 CAMK1DQ8IU85 385 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 LRRC49Q8IUZ0 686 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ZNF567Q8N184 647 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
TPM4-202ENST00000344824 IFT81Q8WYA0 676 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 RAB7BQ96AH8 199 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 WRAP53Q9BUR4 548 aaKnown RBP13.88□□□□□ -0.19
TPM4-202ENST00000344824 ATP13A3Q9H7F0 1226 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 NEU2Q9Y3R4 380 aa13.88□□□□□ -0.19
TPM4-202ENST00000344824 UQCRHLA0A096LP55 91 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 C5orf60A6NFR6 353 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 IGLON5A6NGN9 336 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 TLR4O00206 839 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 MUSKO15146 869 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 MTSS1O43312 755 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 TSPAN6O43657 245 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 AP1G1O43747 822 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 UQCRHP07919 91 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 ITIH2P19823 946 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 RPL21P46778 160 aaKnown RBP13.87□□□□□ -0.19
TPM4-202ENST00000344824 NXPH1P58417 271 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 BASP1P80723 227 aaKnown RBP13.87□□□□□ -0.19
TPM4-202ENST00000344824 SEMG2Q02383 582 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 ITKQ08881 620 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 FOXC1Q12948 553 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 SGCGQ13326 291 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 RFTN1Q14699 578 aaPredicted RBP13.87□□□□□ -0.19
TPM4-202ENST00000344824 GRM3Q14832 879 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 P3H1Q32P28 736 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 N4BP2L1Q5TBK1 243 aaPredicted RBP13.87□□□□□ -0.19
TPM4-202ENST00000344824 GATAD2AQ86YP4 633 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 RTP4Q96DX8 246 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 KLHDC7BQ96G42 594 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 SPATA13Q96N96 652 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 SLC17A9Q9BYT1 436 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 CPEB1Q9BZB8 566 aaKnown RBP13.87□□□□□ -0.19
TPM4-202ENST00000344824 SUV39H2Q9H5I1 410 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 NT5MQ9NPB1 228 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 RBM22Q9NW64 420 aaKnown RBP eCLIP13.87□□□□□ -0.19
TPM4-202ENST00000344824 PAK5Q9P286 719 aa13.87□□□□□ -0.19
TPM4-202ENST00000344824 UPK3BL1B0FP48 263 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 UPK3BL2E5RIL1 263 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 MAGEC1O60732 1142 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 MMP20O60882 483 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 GCATO75600 419 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 PEX11BO96011 259 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 PAK4O96013 591 aaPredicted RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 HLA-DQB2P05538 268 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms