RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 CDH22Q9UJ99 828 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 MGAT4DA6NG13 374 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 TMEM233B4DJY2 109 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
TCF3-202ENST00000344749 TTPAP49638 278 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 KRT72Q14CN4 511 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 AFTPHQ6ULP2 937 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 LRRC8DQ7L1W4 858 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 TRMT11Q7Z4G4 463 aaKnown RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 OR13C4Q8NGS5 318 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 RDH11Q8TC12 318 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 NTAN1Q96AB6 310 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 DACH2Q96NX9 599 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 NKX1-2Q9UD57 310 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 MT-ND1P03886 318 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 PROZP22891 400 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 DAB2P98082 770 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 NRG1Q02297 640 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 GHRHRQ02643 423 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 TCEA2Q15560 299 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 ZIK1Q3SY52 487 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 PITRM1Q5JRX3 1037 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 TSTD2Q5T7W7 516 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 FBXW8Q8N3Y1 598 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 SPAG4Q9NPE6 437 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 NPEPPSL1A6NEC2 478 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 SNUPNO95149 360 aaKnown RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 LDLRP01130 860 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 NTRK1P04629 796 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 HOXB8P17481 243 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 GNA12Q03113 381 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 SELENOMQ8WWX9 145 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 TMEM159Q96B96 161 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 CEP19Q96LK0 163 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 OR52B2Q96RD2 323 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 FAM126AQ9BYI3 521 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 SLC7A8Q9UHI5 535 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 LZTS1Q9Y250 596 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 RAI2Q9Y5P3 530 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 TNRC6CQ9HCJ0 1690 aaKnown RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 A0A0U1RQF3 1178 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 C16orf96A6NNT2 1141 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 UBXN8O00124 270 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 ETS2P15036 469 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 MSH3P20585 1137 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 GJA5P36382 358 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 CCR10P46092 362 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 RPL38P63173 70 aaKnown RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 SQLEQ14534 574 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 P3H2Q8IVL5 708 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 PLD6Q8N2A8 252 aaKnown RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 MIOSQ9NXC5 875 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 TBX10O75333 385 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 NDST3O95803 873 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 GOT2P00505 430 aaKnown RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 AHSGP02765 367 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 ACLYP53396 1101 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 CDC16Q13042 620 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 NEDD8Q15843 81 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 FBXL22Q6P050 247 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 ZYG11AQ6WRX3 759 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 WDR60Q8WVS4 1066 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 EIF2B3Q9NR50 452 aaKnown RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 ARL5AQ9Y689 179 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 SELPP16109 830 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 TYMPP19971 482 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 KCNQ1P51787 676 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 SLC18A2Q05940 514 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 PTPRCAPQ14761 206 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 PABPC1LQ4VXU2 614 aaKnown RBP13.09□□□□□ -0.31
TCF3-202ENST00000344749 ZBTB46Q86UZ6 589 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 RIN3Q8TB24 985 aa13.09□□□□□ -0.31
TCF3-202ENST00000344749 DNAJC25-GNG10A0A024R161 153 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 TRIM38O00635 465 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 NRP2O60462 931 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 RFPL1O75677 317 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 PRKCHP24723 683 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 PWP1Q13610 501 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 PDK3Q15120 406 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 VPS26BQ4G0F5 336 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 ZNF621Q6ZSS3 439 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 GPR141Q7Z602 305 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 CLHC1Q8NHS4 586 aa13.08□□□□□ -0.31
TCF3-202ENST00000344749 RMND5BQ96G75 393 aaPredicted RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms