RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 RIOK3O14730 519 aaKnown RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 PPP1R12AO14974 1030 aaPredicted RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 FTCDO95954 541 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 PECAM1P16284 738 aaPredicted RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 HNRNPA2B1P22626 353 aaKnown RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 XPAP23025 273 aaPredicted RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 CES1P23141 567 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 AKT2P31751 481 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 IFI35P80217 286 aaPredicted RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 ELP6Q0PNE2 266 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 TARDBPQ13148 414 aaKnown RBP eCLIP18.12■□□□□ 0.49
USF2-202ENST00000343550 IHHQ14623 411 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 TMEM52BQ4KMG9 183 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 HES3Q5TGS1 186 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 BBS12Q6ZW61 710 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 CNTD1Q8N815 330 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 SPOCK2Q92563 424 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 HERPUD2Q9BSE4 406 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 FZD3Q9NPG1 666 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 PCDH12Q9NPG4 1184 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 PACSIN2Q9UNF0 486 aaPredicted RBP18.12■□□□□ 0.49
USF2-202ENST00000343550 URB1O60287 2271 aaKnown RBP18.11■□□□□ 0.49
USF2-202ENST00000343550 A0A087WV48 116 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 MIF4GDA9UHW6 222 aaKnown RBP18.11■□□□□ 0.49
USF2-202ENST00000343550 TRIM38O00635 465 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 DDX3YO15523 660 aaKnown RBP18.11■□□□□ 0.49
USF2-202ENST00000343550 SIGLEC6O43699 453 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 NRDCO43847 1150 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 MMP20O60882 483 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 SOCS5O75159 536 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 HLA-DQB2P05538 268 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 DGKAP23743 735 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 PTPN7P35236 360 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 SGCGQ13326 291 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
USF2-202ENST00000343550 PROX2Q3B8N5 592 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 AADACL2Q6P093 401 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 UBL4BQ8N7F7 174 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 OR13H1Q8NG92 308 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 ARRDC2Q8TBH0 407 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 ASB12Q8WXK4 309 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 NXPE2Q96DL1 559 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 HES6Q96HZ4 224 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 OSBPL8Q9BZF1 889 aa18.11■□□□□ 0.49
USF2-202ENST00000343550 A0A1W2PQ67 120 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 NEBLO76041 1014 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 PRKCGP05129 697 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 ACP1P24666 158 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 CLDN2P57739 230 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 DSC2Q02487 901 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 TRAF2Q12933 501 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 ZBTB17Q13105 803 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 FAM182AQ5T1J6 154 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 ERAP2Q6P179 960 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.1■□□□□ 0.49
USF2-202ENST00000343550 PDCD6IPQ8WUM4 868 aaKnown RBP18.1■□□□□ 0.49
USF2-202ENST00000343550 LENG8Q96PV6 779 aaPredicted RBP18.1■□□□□ 0.49
USF2-202ENST00000343550 KLF6Q99612 283 aaPredicted RBP18.1■□□□□ 0.49
USF2-202ENST00000343550 WRAP53Q9BUR4 548 aaKnown RBP18.1■□□□□ 0.49
USF2-202ENST00000343550 LZTFL1Q9NQ48 299 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 HAUS2Q9NVX0 235 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 HS3ST3A1Q9Y663 406 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 LOC400499M0QZD8 3231 aa18.1■□□□□ 0.49
USF2-202ENST00000343550 CETN2P41208 172 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 SEMG2Q02383 582 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 NIPAL4Q0D2K0 466 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 PRKD1Q15139 912 aaPredicted RBP18.09■□□□□ 0.49
USF2-202ENST00000343550 GCNT7Q6ZNI0 430 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 ABI3BPQ7Z7G0 1075 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 ZC3H18Q86VM9 953 aaKnown RBP18.09■□□□□ 0.49
USF2-202ENST00000343550 PAF1Q8N7H5 531 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 CXorf40AQ8TE69 158 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 TFB1MQ8WVM0 346 aaKnown RBP18.09■□□□□ 0.49
USF2-202ENST00000343550 UBE2Q2Q8WVN8 375 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 HAUS1Q96CS2 278 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 NRSN2Q9GZP1 204 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 UCKL1Q9NWZ5 548 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 TTLL3Q9Y4R7 772 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 RAI2Q9Y5P3 530 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 ARID1BQ8NFD5 2236 aaPredicted RBP18.09■□□□□ 0.49
USF2-202ENST00000343550 ATRXP46100 2492 aa18.09■□□□□ 0.49
USF2-202ENST00000343550 APOC4-APOC2K7ER74 178 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 RAD51BO15315 384 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 TM7SF2O76062 418 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 PGLSO95336 258 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 APOC2P02655 101 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 PDHA1P08559 390 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 MMP12P39900 470 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 TEX44Q53QW1 395 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 HS1BP3Q53T59 392 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 Q6ZSR6 202 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 SLC22A18ASQ8N1D0 253 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 OR4C6Q8NH72 309 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 FAM174AQ8TBP5 190 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 ANP32BQ92688 251 aaKnown RBP18.08■□□□□ 0.49
USF2-202ENST00000343550 CENPTQ96BT3 561 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 BMFQ96LC9 184 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 CEP41Q9BYV8 373 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 SEPT10Q9P0V9 454 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms