RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NAPEPLDQ6IQ20 393 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 PDZD4Q76G19 769 aaPredicted RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 CCDC117Q8IWD4 279 aaPredicted RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 VMP1Q96GC9 406 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 HSFY1Q96LI6 401 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 VAT1Q99536 393 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 LHPPQ9H008 270 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 GSTO2Q9H4Y5 243 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 PCDHA9Q9Y5H5 950 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SBF1O95248 1867 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 EEF2KO00418 725 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 DNAJB5O75953 348 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 RSL1D1O76021 490 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 MATN4O95460 622 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SNAP29O95721 258 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 GJB1P08034 283 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 NFKB1P19838 968 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 CAPN3P20807 821 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 TGM1P22735 817 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 YWHAQP27348 245 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 LEPRP48357 1165 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 HNRNPFP52597 415 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 TAS2R39P59534 338 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 POU4F1Q01851 419 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 AQP6Q13520 282 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 FXNQ16595 210 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 RBM48Q5RL73 367 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 PKN3Q6P5Z2 889 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SLC16A12Q6ZSM3 486 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 CHST15Q7LFX5 561 aaPredicted RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 DCPSQ96C86 337 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 NPY6RQ99463 290 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 CTRCQ99895 268 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SMARCAD1Q9H4L7 1026 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 HMG20AQ9NP66 347 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SLC52A3Q9NQ40 469 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 TSC22D4Q9Y3Q8 395 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 TRAF6Q9Y4K3 522 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 A0A0J9YYE9 177 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 PFDN6O15212 129 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 PSMD3O43242 534 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 TPST1O60507 370 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 RAD17O75943 681 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 SHMT2P34897 504 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 GABARAPL2P60520 117 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
HOXA1-201ENST00000343060 SLC14A2Q15849 920 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 UGT3A2Q3SY77 523 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 PCID2Q5JVF3 399 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF618Q5T7W0 954 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 BTBD8Q5XKL5 378 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 PLPPR4Q7Z2D5 763 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 CYP2U1Q7Z449 544 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 LINC00523Q86TU6 105 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 PIGZQ86VD9 579 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 DENND6AQ8IWF6 608 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 DEFB106AQ8N104 65 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 TMCO5AQ8N6Q1 288 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 C2CD4AQ8NCU7 369 aaPredicted RBP9.69□□□□□ -0.86
HOXA1-201ENST00000343060 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
HOXA1-201ENST00000343060 OSCP1Q8WVF1 389 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 APOL2Q9BQE5 337 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 BCL7BQ9BQE9 202 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 TRIM54Q9BYV2 358 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 GPRC5DQ9NZD1 345 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 EGFL7Q9UHF1 273 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 ENPP5Q9UJA9 477 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 USP21Q9UK80 565 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 FIS1Q9Y3D6 152 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 NAALAD2Q9Y3Q0 740 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 TLL2Q9Y6L7 1015 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 MYLKQ15746 1914 aa9.69□□□□□ -0.86
HOXA1-201ENST00000343060 NR5A2O00482 541 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 WNT10BO00744 389 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 UBFD1O14562 309 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ONECUT3O60422 494 aaPredicted RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SYNCRIPO60506 623 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TGFB3P10600 412 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 LCP1P13796 627 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TPH1P17752 444 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ERCC2P18074 760 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 CRHBPP24387 322 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 HCAR3P49019 387 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 MRPL19P49406 292 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 PLA2G16P53816 162 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 AIF1P55008 147 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SCAPQ12770 1279 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 BFSP2Q13515 415 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SPCS2Q15005 226 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 CRY1Q16526 586 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 CLPPQ16740 277 aaPredicted RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 BTLAQ7Z6A9 289 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ANKRD13BQ86YJ7 626 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 PHYKPLQ8IUZ5 450 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms