RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PFKFB4Q16877 469 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SLC9B1Q4ZJI4 515 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 BORAQ6PGQ7 559 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 LENG9Q96B70 501 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SYT4Q9H2B2 425 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 PCDHGB7Q9Y5F8 929 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 TIMM8BQ9Y5J9 83 aaPredicted RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 LINGO3P0C6S8 592 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 PCID2Q5JVF3 399 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF280DQ6N043 979 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 HMBOX1Q6NT76 420 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 OR4C6Q8NH72 309 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 LIN37Q96GY3 246 aaPredicted RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 AP5Z1O43299 807 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 MANFP55145 182 aaKnown RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 FBXW8Q8N3Y1 598 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 NKD1Q969G9 470 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 CGRRF1Q99675 332 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 RHBGQ9H310 441 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 PCDH12Q9NPG4 1184 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 CPSF1Q10570 1443 aaKnown RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 THPOP40225 353 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 QRICH1Q2TAL8 776 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 FAM153CQ494X1 144 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF470Q6ECI4 717 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SYCE2Q6PIF2 218 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 RGL4Q8IZJ4 473 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SLC1A2P43004 574 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 LSM3P62310 102 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 ZYG11BQ9C0D3 744 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 MCCC2Q9HCC0 563 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 TRNAU1APQ9NX07 287 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 NOX1Q9Y5S8 564 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 THEGLP0DJG4 465 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 GADD45AP24522 165 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 ALDH4A1P30038 563 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 CDK16Q00536 496 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 HMGXB4Q9UGU5 601 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 GNA12Q03113 381 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 MTMR2Q13614 643 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 RBM44Q6ZP01 1051 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 C7orf61Q8IZ16 206 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 TRPM4Q8TD43 1214 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 NECAB3Q96P71 396 aaPredicted RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 TMEM121Q9BTD3 319 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 ERP29P30040 261 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 DLSTP36957 453 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 SMARCD1Q96GM5 515 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 DNAAF2Q9NVR5 837 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF792Q3KQV3 632 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 PGM2L1Q6PCE3 622 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 CXorf40AQ8TE69 158 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 BRINP2Q9C0B6 783 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 IFNA4P05014 189 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 AIMP2Q13155 320 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 HASPINQ8TF76 798 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 FKBP7Q9Y680 259 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 CTXN3Q4LDR2 81 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 COLEC12Q5KU26 742 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 DNAJB7Q7Z6W7 309 aaPredicted RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 NKAPQ8N5F7 415 aaKnown RBP17.66■□□□□ 0.42
SMAD4-201ENST00000342988 CASKIN2Q8WXE0 1202 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 TREM1Q9NP99 234 aa17.66■□□□□ 0.42
SMAD4-201ENST00000342988 KCNK1O00180 336 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 PLEKP08567 350 aaPredicted RBP17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ANPEPP15144 967 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 APOL2Q9BQE5 337 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 SEC14L3Q9UDX4 400 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ACTL7BQ9Y614 415 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ABCA8O94911 1581 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ACO1P21399 889 aaKnown RBP17.65■□□□□ 0.42
SMAD4-201ENST00000342988 LHCGRP22888 699 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 C2orf76Q3KRA6 126 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 UBXN11Q5T124 520 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 C9IYK1 514 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 PSMG1O95456 288 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 CTSKP43235 329 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 MASP1P48740 699 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 GJA9P57773 515 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 LDHDQ86WU2 507 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 MARK4Q96L34 752 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ZSCAN5BA6NJL1 495 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 AMHR2Q16671 573 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 RAB12Q6IQ22 244 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 SNX32Q86XE0 403 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 PI4K2AQ9BTU6 479 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 PACSIN3Q9UKS6 424 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 PER2O15055 1255 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 FGBP02675 491 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 SNRPD1P62314 119 aaKnown RBP17.65■□□□□ 0.42
SMAD4-201ENST00000342988 TBC1D21Q8IYX1 336 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ZNHIT2Q9UHR6 403 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 H3BM21 787 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 CREB5Q02930 508 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 SPATA22Q8NHS9 363 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 DCAKDQ8WVC6 231 aa17.65■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF700Q9H0M5 742 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms