RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PSMA3P25788 255 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 AP1S1P61966 158 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 PTPRRQ15256 657 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 C9orf50Q5SZB4 431 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 TMEM25Q86YD3 366 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 SPNS2Q8IVW8 549 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 SPATA6LQ8N4H0 392 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 RDH11Q8TC12 318 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 TSPAN17Q96FV3 270 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 ECT2Q9H8V3 914 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 HEY2Q9UBP5 337 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 MARCOQ9UEW3 520 aaPredicted RBP20.04■□□□□ 0.8
RTN1-202ENST00000342503 SOBPA7XYQ1 873 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 DNAJC8O75937 253 aaPredicted RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 PRAMEF12O95522 483 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 PRSS56P0CW18 603 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 OGNP20774 298 aaKnown RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 LPOP22079 712 aaPredicted RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 ABCE1P61221 599 aaKnown RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 TSNAXIP1Q2TAA8 658 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 PITRM1Q5JRX3 1037 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 ZYG11AQ6WRX3 759 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 ATG14Q6ZNE5 492 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 MTDHQ86UE4 582 aaKnown RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 FSTL5Q8N475 847 aaPredicted RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 OR6K2Q8NGY2 324 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 ZSWIM3Q96MP5 696 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 SORT1Q99523 831 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 OXSMQ9NWU1 459 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 KCNK4Q9NYG8 393 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 EVLQ9UI08 416 aaPredicted RBP20.03■□□□□ 0.8
RTN1-202ENST00000342503 CRYL1Q9Y2S2 319 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 VWA7Q9Y334 891 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 PCDHB9Q9Y5E1 797 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 ATG2AQ2TAZ0 1938 aa20.03■□□□□ 0.8
RTN1-202ENST00000342503 TRIM13O60858 407 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 ARRB2P32121 409 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 CTSOP43234 321 aaPredicted RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 NCALDP61601 193 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 GPM6BQ13491 265 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 ARMC12Q5T9G4 340 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 ASTLQ6HA08 431 aaPredicted RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 AFTPHQ6ULP2 937 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 SDCCAG8Q86SQ7 713 aaPredicted RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 TBC1D1Q86TI0 1168 aaPredicted RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 RBM23Q86U06 439 aaKnown RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 CAMK1DQ8IU85 385 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 TTC30BQ8N4P2 665 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 HEXDCQ8WVB3 486 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 MYO19Q96H55 970 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 UNKQ9C0B0 810 aaKnown RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 IGSF5Q9NSI5 407 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 POLR3BQ9NW08 1133 aaPredicted RBP20.02■□□□□ 0.8
RTN1-202ENST00000342503 ZFP69BQ9UJL9 534 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 DNAJC16Q9Y2G8 782 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 NUMBLQ9Y6R0 609 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 MYO7AQ13402 2215 aa20.02■□□□□ 0.8
RTN1-202ENST00000342503 TARM1B6A8C7 271 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 PGLSO95336 258 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 PENKP01210 267 aaPredicted RBP20.02■□□□□ 0.79
RTN1-202ENST00000342503 HLA-FP30511 346 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 CSNK1DP48730 415 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 EPHB1P54762 984 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 CDKN2DP55273 166 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 SLC20A2Q08357 652 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 ZNF77Q15935 545 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 HSF5Q4G112 596 aaPredicted RBP20.02■□□□□ 0.79
RTN1-202ENST00000342503 FAM45BPQ6NSW5 357 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 ZNF549Q6P9A3 640 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 NAPRTQ6XQN6 538 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 TTC8Q8TAM2 541 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 FAM45AQ8TCE6 357 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 SREK1Q8WXA9 508 aaKnown RBP20.02■□□□□ 0.79
RTN1-202ENST00000342503 ZNF707Q96C28 371 aaPredicted RBP20.02■□□□□ 0.79
RTN1-202ENST00000342503 RPL10LQ96L21 214 aaKnown RBP20.02■□□□□ 0.79
RTN1-202ENST00000342503 TNKS2Q9H2K2 1166 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 LINC00597Q9H2U6 94 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 ZDHHC7Q9NXF8 308 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 XPR1Q9UBH6 696 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 HCFC2Q9Y5Z7 792 aa20.02■□□□□ 0.79
RTN1-202ENST00000342503 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.01■□□□□ 0.79
RTN1-202ENST00000342503 NEDD8-MDP1E9PL57 170 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 ZNF821O75541 412 aaPredicted RBP20.01■□□□□ 0.79
RTN1-202ENST00000342503 PIGNO95427 931 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 CEBPBP17676 345 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 CTPS1P17812 591 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 STC1P52823 247 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 AQP5P55064 265 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 USP4Q13107 963 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 CSHL1Q14406 222 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 TYSND1Q2T9J0 566 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 FUT11Q495W5 492 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 DGKKQ5KSL6 1271 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 PDE12Q6L8Q7 609 aaKnown RBP20.01■□□□□ 0.79
RTN1-202ENST00000342503 ADGRD2Q7Z7M1 963 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 METTL3Q86U44 580 aaKnown RBP20.01■□□□□ 0.79
RTN1-202ENST00000342503 PPP4R1Q8TF05 950 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 PIH1D2Q8WWB5 315 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 PPM1EQ8WY54 764 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms