RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PNPLA8Q9NP80 782 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CATSPERZQ9NTU4 200 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 PTTG2Q9NZH5 202 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 BEST1O76090 585 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 ABCB1P08183 1280 aaPredicted RBP12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 DHRS4L1P0CG22 281 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 PSEN2P49810 448 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 OXCT1P55809 520 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 ECT2LQ008S8 904 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 ZNF177Q13360 481 aaPredicted RBP12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 GK3PQ14409 553 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 SNX17Q15036 470 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 ADAM2Q99965 735 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 TM6SF2Q9BZW4 377 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 COMMD8Q9NX08 183 aa12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 GOLGB1Q14789 3259 aaKnown RBP12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.42
SNRNP48-201ENST00000342415 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 J3QRK9 145 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 EI24O14681 340 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 PIP5K1BO14986 540 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 RNASEH2AO75792 299 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 GSNP06396 782 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 CLCN5P51795 746 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 CACHD1Q5VU97 1274 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 ZC3HC1Q86WB0 502 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 LZTR1Q8N653 840 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 CNTD1Q8N815 330 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 OLIG1Q8TAK6 271 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 RDH11Q8TC12 318 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 UTP15Q8TED0 518 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 GATA6Q92908 595 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 FBXL8Q96CD0 374 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 TPD52L3Q96J77 140 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 RPL10LQ96L21 214 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 WDR83Q9BRX9 315 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 ATP13A1Q9HD20 1204 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 OAZ3Q9UMX2 235 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 ST3GAL5Q9UNP4 418 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 MATN2O00339 956 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 H6PDO95479 791 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 S100A5P33763 92 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 TRNP1Q6NT89 227 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 CARNMT1Q8N4J0 409 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 PHC3Q8NDX5 983 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 OR6K2Q8NGY2 324 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 TWIST2Q8WVJ9 160 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 SMAD5Q99717 465 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 BBS2Q9BXC9 721 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 AGO3Q9H9G7 860 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 PLGRKTQ9HBL7 147 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 MARCH2Q9P0N8 246 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 INVSQ9Y283 1065 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 LRATO95237 230 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 TKTP29401 623 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 DAOAP59103 153 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 RPL38P63173 70 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 MS4A2Q01362 244 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 CLEC20AQ6ZU45 233 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 PPP1R2P1Q96PQ5 205 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 NOL6Q9H6R4 1146 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 MOCS1Q9NZB8 636 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 TMCO1Q9UM00 188 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 CNTN6Q9UQ52 1028 aa12.45□□□□□ -0.42
SNRNP48-201ENST00000342415 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 APOA1P02647 267 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 CLDN10P78369 228 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 GALNT5Q7Z7M9 940 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 OR56A4Q8NGH8 313 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 RORBQ92753 470 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 MAML3Q96JK9 1138 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ADI1Q9BV57 179 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SLC39A8Q9C0K1 460 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ABCC13Q9NSE7 274 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 TMEM161AQ9NX61 479 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 IGSF9Q9P2J2 1179 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 DNAJB4Q9UDY4 337 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SEPT3Q9UH03 358 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 NUMBLQ9Y6R0 609 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 COL18A1P39060 1754 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 LOC100506127A0A0U1RQW1 187 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 GPR182O15218 404 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 CD3EAPO15446 510 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 IL4RP24394 825 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 RPL10P27635 214 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 OGFOD2Q6N063 350 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SERPINB11Q96P15 392 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 POLR1EQ9GZS1 481 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 PALMDQ9NP74 551 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms