RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HEATR6Q6AI08 1181 aaKnown RBP18.58■□□□□ 0.56
SMPD1-201ENST00000342245 OR6F1Q8NGZ6 308 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 TFAP2BQ92481 460 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 PROX1Q92786 737 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 ADPGKQ9BRR6 497 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 USP21Q9UK80 565 aa18.58■□□□□ 0.56
SMPD1-201ENST00000342245 POLR1CO15160 346 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 APOA1P02647 267 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SHMT2P34897 504 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SESN2P58004 480 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 POU6F1Q14863 301 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 CYP51A1Q16850 503 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SMU1Q2TAY7 513 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 ANO4Q32M45 955 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 LDHDQ86WU2 507 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 TOR1AIP2Q8NFQ8 470 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 BSNDQ8WZ55 320 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 NODALQ96S42 347 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 RAVER2Q9HCJ3 691 aaKnown RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 TM9SF3Q9HD45 589 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 DDX28Q9NUL7 540 aaKnown RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 NME4O00746 187 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 TBC1D4O60343 1298 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 THRBP10828 461 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 CTRB1P17538 263 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 TAL1P17542 331 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 ITGB5P18084 799 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SFNP31947 248 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 GP2P55259 537 aaKnown RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 CTRB2Q6GPI1 263 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 DESI1Q6ICB0 168 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 LAYNQ6UX15 382 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 HORMAD1Q86X24 394 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SIAH1Q8IUQ4 282 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 MCPH1Q8NEM0 835 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 PCDH19Q8TAB3 1148 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 GIPC2Q8TF65 315 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SLC22A17Q8WUG5 538 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 MFSD3Q96ES6 412 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 SCYL1Q96KG9 808 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 MMP27Q9H306 513 aa18.57■□□□□ 0.56
SMPD1-201ENST00000342245 EML4Q9HC35 981 aaKnown RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 AGO4Q9HCK5 861 aaKnown RBP18.57■□□□□ 0.56
SMPD1-201ENST00000342245 A0A0A0MRY4 1105 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 PDZK1P1A8MUH7 402 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 HACD1B0YJ81 288 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 HAT1O14929 419 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 ARPC2O15144 300 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 XYLBO75191 536 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 CCNE2O96020 404 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 CCR10P46092 362 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 ACOT2P49753 483 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 CLCNKBP51801 687 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 WNT7BP56706 349 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 PRPSAP1Q14558 356 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 ADPRMQ3LIE5 342 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 ATAD3CQ5T2N8 411 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 TMEM151AQ8N4L1 468 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 SPATA13Q96N96 652 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 VPS35Q96QK1 796 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 EPS8L2Q9H6S3 715 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 GIMAP4Q9NUV9 329 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 TK2O00142 265 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 PCMT1P22061 227 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 GMPRP36959 345 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 ARSFP54793 590 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 TPD52P55327 224 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-201ENST00000342245 CRADDP78560 199 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 EIF2B5Q13144 721 aaKnown RBP18.56■□□□□ 0.56
SMPD1-201ENST00000342245 DAG1Q14118 895 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 GJC2Q5T442 439 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-201ENST00000342245 PMF1Q6P1K2 205 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 GALNT12Q8IXK2 581 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 CLYBLQ8N0X4 340 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 AIFM2Q9BRQ8 373 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 TMEM246Q9BRR3 403 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 B3GNT4Q9C0J1 378 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 SOX17Q9H6I2 414 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-201ENST00000342245 NSMCE4AQ9NXX6 385 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 PMF1-BGLAPU3KQ54 211 aa18.56■□□□□ 0.56
SMPD1-201ENST00000342245 H0Y626 953 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 H0Y858 1186 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 ZW10O43264 779 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 TRIM16O95361 564 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 OXTRP30559 389 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 DDOSTP39656 456 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 DNAJB13P59910 316 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 ZNF45Q02386 682 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 GRM1Q13255 1194 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 TYSND1Q2T9J0 566 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 CRY2Q49AN0 593 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 STEAP3Q658P3 488 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 PAGE2Q7Z2X7 111 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 PIGZQ86VD9 579 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 P2RY8Q86VZ1 359 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 BEND7Q8N7W2 519 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 ZNF555Q8NEP9 628 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms