RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SMAD6O43541 496 aaKnown RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 KDELR3O43731 214 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 RNASEH1O60930 286 aaKnown RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 ERCC2P18074 760 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 C5AR1P21730 350 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 HOXD12P35452 270 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CYLC1P35663 651 aaPredicted RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 ARHGAP25P42331 645 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 DPP6P42658 865 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 PTGER3P43115 390 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 ARSEP51690 589 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 GSDMDP57764 484 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 SMTNL2Q2TAL5 461 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 TMEM201Q5SNT2 666 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 LYSMD4Q5XG99 296 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 LINGO4Q6UY18 593 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 LIAT1Q6ZQX7 453 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CACUL1Q86Y37 369 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CPNE8Q86YQ8 564 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 TMTC1Q8IUR5 882 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 ARHGAP12Q8IWW6 846 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 OR2A12Q8NGT7 310 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 HMCESQ96FZ2 354 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 TOE1Q96GM8 510 aaKnown RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 ZWILCHQ9H900 591 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 PCDH18Q9HCL0 1135 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 SEMA4GQ9NTN9 838 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.41□□□□□ -0.74
TPM3-207ENST00000341372 FZD4Q9ULV1 537 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 USP27XA6NNY8 438 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 H3BRJ5 948 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 MID1O15344 667 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 FOXD2O60548 495 aaPredicted RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 GSTP1P09211 210 aaKnown RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 ZNF806P0C7X5 589 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 DRD3P35462 400 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 SPEM2Q0P670 501 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 HADHQ16836 314 aaKnown RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 PPP6R3Q5H9R7 873 aaPredicted RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 KCNT1Q5JUK3 1230 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 DSG4Q86SJ6 1040 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 MMAAQ8IVH4 418 aaKnown RBP10.41□□□□□ -0.74
TPM3-207ENST00000341372 TMEFF1Q8IYR6 380 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 NPWQ8N729 165 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CASKIN2Q8WXE0 1202 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CCDC114Q96M63 670 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CSPG4P5Q96PW8 444 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 ARRDC1-AS1Q9H2J1 176 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 PDFQ9HBH1 243 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 SGK2Q9HBY8 427 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 SERGEFQ9UGK8 458 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 CFAP54Q96N23 3096 aa10.41□□□□□ -0.74
TPM3-207ENST00000341372 PCDH15Q96QU1 1955 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 A0A0A6YYK5 440 aaPredicted RBP10.4□□□□□ -0.74
TPM3-207ENST00000341372 A6NCN8 305 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 SPINT1O43278 529 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 SLC8A1P32418 973 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 ARL4AP40617 200 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 PSMD8P48556 350 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 CCT5P48643 541 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 DHPSP49366 369 aaPredicted RBP10.4□□□□□ -0.74
TPM3-207ENST00000341372 TAS2R40P59535 323 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 ZNF33AQ06730 810 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 ACCSLQ4AC99 568 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 SYT12Q8IV01 421 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 CMIPQ8IY22 773 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 AADATQ8N5Z0 425 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 LZTR1Q8N653 840 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 TMIEQ8NEW7 156 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 DNASE2BQ8WZ79 361 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 HSPH1Q92598 858 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 VOPP1Q96AW1 172 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 FAF2Q96CS3 445 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 VPS45Q9NRW7 570 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 PILRBQ9UKJ0 227 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 SARDHQ9UL12 918 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 PCDHA9Q9Y5H5 950 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 ACTL7AQ9Y615 435 aa10.4□□□□□ -0.74
TPM3-207ENST00000341372 SPTBN4Q9H254 2564 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 C1QTNF3-AMACRE9PGA6 284 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 SLC7A4O43246 635 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 EFSO43281 561 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 NDUFS2O75306 463 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 NDUFA10O95299 355 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 GSRP00390 522 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 CTSLP07711 333 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 KRT7P08729 469 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 IL4RP24394 825 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 ACSL1P33121 698 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 MAGEA1P43355 309 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 CREB5Q02930 508 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 FAM46CQ5VWP2 391 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 PRR23CQ6ZRP0 262 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 RAB44Q7Z6P3 723 aaPredicted RBP10.4□□□□□ -0.75
TPM3-207ENST00000341372 PIP4K2CQ8TBX8 421 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 BTN2A2Q8WVV5 523 aa10.4□□□□□ -0.75
TPM3-207ENST00000341372 HSPA12BQ96MM6 686 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms