RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 BMP6P22004 513 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 KCNK10P57789 538 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 RPS24P62847 133 aaKnown RBP11.24□□□□□ -0.61
ATXN3-201ENST00000340660 HGSNATQ68CP4 663 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 DENND6BQ8NEG7 585 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATXN3-201ENST00000340660 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 C5AR2Q9P296 337 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
ATXN3-201ENST00000340660 G3BP2Q9UN86 482 aaKnown RBP11.24□□□□□ -0.61
ATXN3-201ENST00000340660 R3HCC1Q9Y3T6 440 aaKnown RBP11.24□□□□□ -0.61
ATXN3-201ENST00000340660 RYR3Q15413 4870 aa11.24□□□□□ -0.61
ATXN3-201ENST00000340660 LRP4O75096 1905 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 CCL21O00585 134 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 POLR1CO15160 346 aaPredicted RBP11.23□□□□□ -0.61
ATXN3-201ENST00000340660 FAM13AO94988 1023 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 KRT2P35908 639 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 NNMTP40261 264 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 YPEL5P62699 121 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 GTF2BQ00403 316 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 CDH18Q13634 790 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 LAMB3Q13751 1172 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 ASIC2Q16515 512 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 Q6ZS92 163 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 ANKRD36BP1Q96IX9 119 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 TRAPPC9Q96Q05 1148 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 HDAC8Q9BY41 377 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 C7orf69Q9H7B7 122 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 PDP2Q9P2J9 529 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 ST6GALNAC2Q9UJ37 374 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 ZNF281Q9Y2X9 895 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 FADS3Q9Y5Q0 445 aa11.23□□□□□ -0.61
ATXN3-201ENST00000340660 SONP18583 2426 aaKnown RBP11.23□□□□□ -0.61
ATXN3-201ENST00000340660 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
ATXN3-201ENST00000340660 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 A8MU76 341 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 MASP2O00187 686 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 RASGRP1O95267 797 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 MOCS3O95396 460 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 CLDN14O95500 239 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 CST3P01034 146 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-201ENST00000340660 SSTR4P31391 388 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 EVCP57679 992 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 PPP2R2BQ00005 443 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 CCDC15Q0P6D6 951 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 SGCGQ13326 291 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 SQSTM1Q13501 440 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 ACCSLQ4AC99 568 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 VWA5B1Q5TIE3 1220 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 TMEM71Q6P5X7 295 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 ARHGAP22Q7Z5H3 698 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 VN1R5Q7Z5H4 357 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 ACOT1Q86TX2 421 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 C17orf82Q86X59 251 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-201ENST00000340660 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 HJURPQ8NCD3 748 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-201ENST00000340660 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 SMYD3Q9H7B4 428 aa11.22□□□□□ -0.61
ATXN3-201ENST00000340660 NCOA6Q14686 2063 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-201ENST00000340660 IGHV1OR21-1A0A087WYE8 117 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 A0A0U1RQS6 177 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 RHPN2P1A8MT19 583 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 CPLX1O14810 134 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.61
ATXN3-201ENST00000340660 FAM200BP0CF97 657 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 TRIM49P0CI25 452 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 TRIM49CP0CI26 452 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 AGAP20933 346 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 SCP2P22307 547 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 ADORA2BP29275 332 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 SLC12A3P55017 1021 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 TNNC1P63316 161 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 AAMPQ13685 434 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 DLG2Q15700 870 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 SNAP47Q5SQN1 464 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 NADSYN1Q6IA69 706 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 MTFR2Q6P444 385 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 TAF8Q7Z7C8 310 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 ZDHHC13Q8IUH4 622 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 TRIM42Q8IWZ5 723 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 SEC14L1Q92503 715 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 DPEP2Q9H4A9 486 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 MBNL1Q9NR56 388 aaKnown RBP11.21□□□□□ -0.61
ATXN3-201ENST00000340660 FAM49BQ9NUQ9 324 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 PCMTD2Q9NV79 361 aa11.21□□□□□ -0.61
ATXN3-201ENST00000340660 HMX2A2RU54 273 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 C21orf140B9A014 251 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 IRAK2O43187 625 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 MSI1O43347 362 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms