RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 SLC35G4P0C7Q5 338 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 RGS17Q9UGC6 210 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 MED31Q9Y3C7 131 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 TTPAP49638 278 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 SLC12A3P55017 1021 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 DRG2P55039 364 aaKnown RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 PDK3Q15120 406 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ZNF75CPQ92670 426 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 DIRAS2Q96HU8 199 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ATP13A3Q9H7F0 1226 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 RNF121Q9H920 327 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 EMC3Q9P0I2 261 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 HCN3Q9P1Z3 774 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 TCOF1Q13428 1488 aaKnown RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 IL1BP01584 269 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 CTSKP43235 329 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 VLDLRP98155 873 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 PTPN11Q06124 597 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 C2orf49Q9BVC5 232 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 SORCS3Q9UPU3 1222 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ANXA2P2A6NMY6 339 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ANXA2P07355 339 aaKnown RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 AP2S1P53680 142 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-203ENST00000340635 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 IL22Q9GZX6 179 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 PNPLA3Q9NST1 481 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 FSBPO95073 299 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ANKRD13AQ8IZ07 590 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 TIMMDC1Q9NPL8 285 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 KCNK4Q9NYG8 393 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ATXN10Q9UBB4 475 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 ALG5Q9Y673 324 aa13.9□□□□□ -0.18
PDE4D-203ENST00000340635 RGS19P49795 217 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ALDH5A1P51649 535 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 GRPEL2Q8TAA5 225 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 MYH8P13535 1937 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ZSCAN5CA6NGD5 496 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 DDX3XO00571 662 aaKnown RBP eCLIP13.89□□□□□ -0.193e-7■■■■□ 19.9
PDE4D-203ENST00000340635 E2F3O00716 465 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 RIPK2O43353 540 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 FGBP02675 491 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 YBX3P16989 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 LACTB2Q53H82 288 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ADAM32Q8TC27 787 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ACTL9Q8TC94 416 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ZSCAN5AQ9BUG6 496 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ANKZF1Q9H8Y5 726 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 CUEDC1Q9NWM3 386 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 RPH3AQ9Y2J0 694 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 NOX1Q9Y5S8 564 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 DPYSQ14117 519 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 SNAPC1Q16533 368 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TAPT1Q6NXT6 567 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 RBM44Q6ZP01 1051 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PPCDCQ96CD2 204 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 AP2M1Q96CW1 435 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PHB2Q99623 299 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ELOVL4Q9GZR5 314 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 SMURF2Q9HAU4 748 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 A0A087X0B3 334 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 DCKP27707 260 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 CHRNA5P30532 468 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 HSD17B2P37059 387 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 BNIP2Q12982 314 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 RHEBQ15382 184 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PRAMEF17Q5VTA0 474 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PRR23BQ6ZRT6 265 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 CENPSQ8N2Z9 138 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 LRRC20Q8TCA0 184 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 OR52E6Q96RD3 313 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TMEM27Q9HBJ8 222 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TSPAN16Q9UKR8 245 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TIMM13Q9Y5L4 95 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 SAGE2PA6NJ88 616 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PLK4O00444 970 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 UGT2B11O75310 529 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 MICAL2O94851 1124 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 SCGB1D2O95969 90 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 MSL3P1P0C860 447 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 HGFP14210 728 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TCEA1P23193 301 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 LARS2Q15031 903 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 POP1Q99575 1024 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 CLK4Q9HAZ1 481 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TRDMT1O14717 391 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 PROSCO94903 275 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ACAT1P24752 427 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
PDE4D-203ENST00000340635 TLR1Q15399 786 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
PDE4D-203ENST00000340635 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms