RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 OSCP1Q8WVF1 389 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 VOPP1Q96AW1 172 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PKMYT1Q99640 499 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MAGEE1Q9HCI5 957 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ZBTB26Q9HCK0 441 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 KCNH7Q9NS40 1196 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ARHGAP28Q9P2N2 729 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MTRRQ9UBK8 725 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ZMAT5Q9UDW3 170 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF639Q9UID6 485 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PCDHGC3Q9UN70 934 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 YBX2Q9Y2T7 364 aaKnown RBP5.62□□□□□ -1.51
CSDE1-202ENST00000339438 PCDHB12Q9Y5F1 795 aa5.62□□□□□ -1.51
CSDE1-202ENST00000339438 MN1Q10571 1320 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 MYLKQ15746 1914 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF839A8K0R7 811 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 B8ZZF3 427 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SLC22A2O15244 555 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 GPC4O75487 556 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 VAPBO95292 243 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SERPINE1P05121 402 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 JUNP05412 331 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ASGR1P07306 291 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 AKR1A1P14550 325 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 DDX5P17844 614 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NCF2P19878 526 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CD40LGP29965 261 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ABCE1P61221 599 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 COPZ1P61923 177 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SLC13A2Q13183 592 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 DPYSL3Q14195 570 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 HERC3Q15034 1050 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CARTPTQ16568 116 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 BBS9Q3SYG4 887 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 YIF1BQ5BJH7 314 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SNAP47Q5SQN1 464 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 LRRC38Q5VT99 294 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF773Q6PK81 442 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM184AQ6ZMB5 413 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ERMP1Q7Z2K6 904 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 MRPL10Q7Z7H8 261 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 LGI2Q8N0V4 545 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM151AQ8N4L1 468 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 RDH13Q8NBN7 331 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TP53I13Q8NBR0 393 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SLC4A11Q8NBS3 891 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SIMC1Q8NDZ2 872 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 OR6Q1Q8NGQ2 317 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 OR2T34Q8NGX1 318 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PPP1R16BQ96T49 567 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SERPINI1Q99574 410 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CBWD1Q9BRT8 395 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 FUNDC2Q9BWH2 189 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NARFLQ9H6Q4 476 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 RUBCNLQ9H714 662 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CDHR5Q9HBB8 845 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PLSCR3Q9NRY6 295 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.61□□□□□ -1.511e-8■□□□□ 9.6
CSDE1-202ENST00000339438 GMPR2Q9P2T1 348 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NAALAD2Q9Y3Q0 740 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM191CA6NGB0 347 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 G3V2L1 256 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SGK1O00141 431 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NOP56O00567 594 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 GRID2O43424 1007 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SYNCRIPO60506 623 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 FOSP01100 380 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NR3C2P08235 984 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TMEM191BP0C7N4 346 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ICAM2P13598 275 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 IL1R2P27930 398 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PKLRP30613 574 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 MAGEA6P43360 314 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CSRP3P50461 194 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 RAD23AP54725 363 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SOX10P56693 466 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 B2MP61769 119 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 SMAD3P84022 425 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 BRMS1LQ5PSV4 323 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 C9orf50Q5SZB4 431 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ELMOD2Q8IZ81 293 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ACSF2Q96CM8 615 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ST6GAL2Q96JF0 529 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 RAD21L1Q9H4I0 556 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 ATP13A2Q9NQ11 1180 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TOPORSQ9NS56 1045 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 MOCS1Q9NZB8 636 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 HMGXB4Q9UGU5 601 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 COLQQ9Y215 455 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 DGKBQ9Y6T7 804 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 C19orf67A6NJJ6 358 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 E7ENX8 843 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 F8VP50 259 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 CCRL2O00421 344 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TRIM38O00635 465 aa5.61□□□□□ -1.51
CSDE1-202ENST00000339438 NRG2O14511 850 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 TRDMT1O14717 391 aaKnown RBP5.61□□□□□ -1.51
CSDE1-202ENST00000339438 PAPSS1O43252 624 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms