RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ARFIP2P53365 341 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 POU4F1Q01851 419 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 ACTN3Q08043 901 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 SLC20A2Q08357 652 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 LAMB3Q13751 1172 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 SHHQ15465 462 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 TAF1AQ15573 450 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 FSTL5Q8N475 847 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 ZNF707Q96C28 371 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 TSNARE1Q96NA8 513 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 BBS2Q9BXC9 721 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 CAPN7Q9Y6W3 813 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 FGF19O95750 216 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 ALPIP09923 528 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 DDX6P26196 483 aaKnown RBP eCLIP22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 EPHB1P54762 984 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 CDKN2DP55273 166 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 GALNTL6Q49A17 601 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 PITRM1Q5JRX3 1037 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 DGKKQ5KSL6 1271 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 HECTD2Q5U5R9 776 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 NAPRTQ6XQN6 538 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 CRLF3Q8IUI8 442 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 RYBPQ8N488 228 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 PEX13Q92968 403 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 FAM136AQ96C01 138 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 CATSPERZQ9NTU4 200 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 SLC12A4Q9UP95 1085 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 WNT6Q9Y6F9 365 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 C2orf81A6NN90 581 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 ZNF821O75541 412 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 SERPINE1P05121 402 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 HNRNPA1P09651 372 aaKnown RBP eCLIP22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 CRABP2P29373 138 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 HOXA9P31269 272 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 CLCN5P51795 746 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 FUT11Q495W5 492 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 MTDHQ86UE4 582 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 ITFG1Q8TB96 612 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 MYLIPQ8WY64 445 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 GPR78Q96P69 363 aa22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 YBX2Q9Y2T7 364 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-203ENST00000339162 POLD2P49005 469 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 CDKN1CP49918 316 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 CSHL1Q14406 222 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 SETDB1Q15047 1291 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 MRNIPQ6NTE8 343 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 PIM3Q86V86 326 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 MICALL1Q8N3F8 863 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 LMLNQ96KR4 655 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 TLE6Q9H808 572 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 POLR3BQ9NW08 1133 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 XPR1Q9UBH6 696 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 VWA7Q9Y334 891 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 HELZP42694 1942 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 TRIM24O15164 1050 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 FZD6O60353 706 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 HSF5Q4G112 596 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 LY6G5CQ5SRR4 150 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 LRRC8EQ6NSJ5 796 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 TMC5Q6UXY8 1006 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 PAF1Q8N7H5 531 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 NAT16Q8N8M0 369 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 ST13P5Q8NFI4 369 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 HEXDCQ8WVB3 486 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 IRF7Q92985 503 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 SGF29Q96ES7 293 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 FAM96AQ9H5X1 160 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 ACTR5Q9H9F9 607 aaPredicted RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 HEY2Q9UBP5 337 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 FKBPLQ9UIM3 349 aa22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 MRPS23Q9Y3D9 190 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-203ENST00000339162 KLHL2O95198 593 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 LPOP22079 712 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 PMLP29590 882 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 ZNF77Q15935 545 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 DBN1Q16643 649 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 ZNF549Q6P9A3 640 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 RTL10Q7L3V2 364 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 ZNF398Q8TD17 642 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 HTATIP2Q9BUP3 242 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 PIDD1Q9HB75 910 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 GPAMQ9HCL2 828 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 DNAJC16Q9Y2G8 782 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 REV3LO60673 3130 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 DCTN3O75935 186 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 FSBPO95073 299 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 SRCP12931 536 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 TYRP14679 529 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 AP1S1P61966 158 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 BNIP1Q12981 228 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 ARMC12Q5T9G4 340 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 TBC1D1Q86TI0 1168 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 ANKRD49Q8WVL7 239 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 MYO19Q96H55 970 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 SORT1Q99523 831 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 SPHK2Q9NRA0 654 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 RIMKLBQ9ULI2 386 aa22.45■■□□□ 1.18
PDLIM2-203ENST00000339162 SERPINB3P29508 390 aa22.44■■□□□ 1.18
PDLIM2-203ENST00000339162 AQP5P55064 265 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms