RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HOXD12P35452 270 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ADCY8P40145 1251 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 PPP2CBP62714 309 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 PPP2CAP67775 309 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 BASP1P80723 227 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SARNPP82979 210 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 DR1Q01658 176 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 GPS1Q13098 491 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SEMA5AQ13591 1074 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 DHX34Q14147 1143 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SPARCL1Q14515 664 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 STAT4Q14765 748 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ACOX1Q15067 660 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SIRPB2Q5JXA9 342 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 DNTTIP2Q5QJE6 756 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SEL1L3Q68CR1 1132 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 KCTD11Q693B1 232 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 CRTC1Q6UUV9 634 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 PPP1R21Q6ZMI0 780 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 GLIS1Q8NBF1 620 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 CEP76Q8TAP6 659 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 KLK6Q92876 244 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SLCO2A1Q92959 643 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SKA1Q96BD8 255 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 SERAC1Q96JX3 654 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 LENG8Q96PV6 779 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 LYSMD1Q96S90 227 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 KRT12Q99456 494 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 GORASP1Q9BQQ3 440 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 GPR63Q9BZJ6 419 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 TRABDQ9H4I3 376 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ZFYVE1Q9HBF4 777 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ARNT2Q9HBZ2 717 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 GGT7Q9UJ14 662 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 ZFR2Q9UPR6 939 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 HS3ST3A1Q9Y663 406 aa11.94□□□□□ -0.5
SPTLC1-202ENST00000337841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 C1orf232A0A0U1RR37 186 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 RGSL1A5PLK6 1076 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 NPIPB15A6NHN6 443 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 ESPNB1AK53 854 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 C10orf142B7Z368 130 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 WNT9AO14904 365 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 BCAT2O15382 392 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF500O60304 480 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 EPN2O95208 641 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 APRTP07741 180 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 ATXN1LP0C7T5 689 aaKnown RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 C6P13671 934 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 HNRNPA2B1P22626 353 aaKnown RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 PTGIRP43119 386 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 VPS41P49754 854 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 CDK16Q00536 496 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 NHLH1Q02575 133 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 RALGDSQ12967 914 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 TEAD4Q15561 434 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 DUOXA1Q1HG43 343 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 RAVER1Q8IY67 606 aaKnown RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 CBARPQ8N350 705 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 DNAAF3Q8N9W5 541 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 APOL2Q9BQE5 337 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 ARRDC1-AS1Q9H2J1 176 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 EIF2B3Q9NR50 452 aaKnown RBP11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 AASDHPPTQ9NRN7 309 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 RAD18Q9NS91 495 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 NCDNQ9UBB6 729 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 ASIC3Q9UHC3 531 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 PILRBQ9UKJ0 227 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 NEU2Q9Y3R4 380 aa11.93□□□□□ -0.5
SPTLC1-202ENST00000337841 A0A1B0GTW7 788 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 FAM187AA6NFU0 413 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 C2orf81A6NN90 581 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 FPGTO14772 594 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 MAGEC1O60732 1142 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 USP12O75317 370 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 RECQL5O94762 991 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 SUN1O94901 812 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 CLDN7O95471 211 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 CRTAMO95727 393 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 PIRTP0C851 137 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 CHRNA4P43681 627 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 RACK1P63244 317 aaKnown RBP11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 PTSQ03393 145 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 CDH17Q12864 832 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 LAMB3Q13751 1172 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 PTK6Q13882 451 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 LRRC14Q15048 493 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 AGERQ15109 404 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 PTPRRQ15256 657 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 CNGA3Q16281 694 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 LRRC66Q68CR7 880 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF572Q7Z3I7 529 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 TMC3Q7Z5M5 1100 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 TSPAN33Q86UF1 283 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 NRSN1Q8IZ57 195 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 CEP112Q8N8E3 955 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms