RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 TMEM114B3SHH9 223 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 TRAFD1O14545 582 aaPredicted RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 SCAMP3O14828 347 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 AURKAO14965 403 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 CD3EAPO15446 510 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 PHGDHO43175 533 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 ZNF821O75541 412 aaPredicted RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 PGLSO95336 258 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 MT-CO1P00395 513 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 CD9P21926 228 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 LPOP22079 712 aaPredicted RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 CD70P32970 193 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 MAGEA9P43362 315 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 KPNA2P52292 529 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 ZNF789Q5FWF6 425 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 ELMSAN1Q6PJG2 1045 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 AFTPHQ6ULP2 937 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 GLT6D1Q7Z4J2 308 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 PTAR1Q7Z6K3 402 aaPredicted RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 CRLF3Q8IUI8 442 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMO1-201ENST00000335790 OR6P1Q8NGX9 317 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 OR4L1Q8NH43 312 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 MICAL1Q8TDZ2 1067 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 VOPP1Q96AW1 172 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 RMDN1Q96DB5 314 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 ELMO2Q96JJ3 720 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 SLC2A11Q9BYW1 496 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 C20orf27Q9GZN8 174 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 LMAN2LQ9H0V9 348 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 STN1Q9H668 368 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 MAGEE1Q9HCI5 957 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 OXSMQ9NWU1 459 aa13.52□□□□□ -0.25
LMO1-201ENST00000335790 FCF1Q9Y324 198 aaKnown RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 KIF26AQ9ULI4 1882 aaPredicted RBP13.52□□□□□ -0.25
LMO1-201ENST00000335790 MYOFQ9NZM1 2061 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 ANKRD65E5RJM6 399 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 TRIM13O60858 407 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 RALBP11234 206 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 ALOX15P16050 662 aaPredicted RBP13.51□□□□□ -0.25
LMO1-201ENST00000335790 FDXRP22570 491 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 GMPRP36959 345 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 SLC1A6P48664 564 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 STC1P52823 247 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 ARFIP2P53365 341 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 OVGP1Q12889 678 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 DLG1Q12959 904 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 SETDB1Q15047 1291 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 ZNF697Q5TEC3 545 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 HECTD2Q5U5R9 776 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 LRRC8EQ6NSJ5 796 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 RAPH1Q70E73 1250 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
LMO1-201ENST00000335790 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 LPCAT1Q8NF37 534 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 PIH1D2Q8WWB5 315 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 SREK1Q8WXA9 508 aaKnown RBP13.51□□□□□ -0.25
LMO1-201ENST00000335790 STON2Q8WXE9 905 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 IRF7Q92985 503 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 OLFM1Q99784 485 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 CEP44Q9C0F1 390 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 SPHK2Q9NRA0 654 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 HAO1Q9UJM8 370 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 RUVBL2Q9Y230 463 aaKnown RBP13.51□□□□□ -0.25
LMO1-201ENST00000335790 VWA7Q9Y334 891 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 PPIL1Q9Y3C6 166 aa13.51□□□□□ -0.25
LMO1-201ENST00000335790 VCANP13611 3396 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 OR51F1A6NGY5 319 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.5□□□□□ -0.25
LMO1-201ENST00000335790 SMAD6O43541 496 aaKnown RBP13.5□□□□□ -0.25
LMO1-201ENST00000335790 ATP5HO75947 161 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 PRAMEF12O95522 483 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 PIRTP0C851 137 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 SRCP12931 536 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 MYOGP15173 224 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 COL9A1P20849 921 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 HLA-FP30511 346 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 NUMBP49757 651 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 ABCE1P61221 599 aaKnown RBP13.5□□□□□ -0.25
LMO1-201ENST00000335790 IRX4P78413 519 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 SULT2A1Q06520 285 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.25
LMO1-201ENST00000335790 GPM6BQ13491 265 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 KCNC3Q14003 757 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 SEMA3AQ14563 771 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 HSF5Q4G112 596 aaPredicted RBP13.5□□□□□ -0.25
LMO1-201ENST00000335790 ARMC12Q5T9G4 340 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 ZNF549Q6P9A3 640 aa13.5□□□□□ -0.25
LMO1-201ENST00000335790 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms