RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 GRIA1P42261 906 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 MAGEA6P43360 314 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 CCR5P51681 352 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 PTPN5P54829 565 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 CDK16Q00536 496 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ELF2Q15723 593 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 CNGA3Q16281 694 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZNF284Q2VY69 593 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 PLK5Q496M5 336 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 IZUMO3Q5VZ72 239 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 LRRC66Q68CR7 880 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 PMS2CLQ68D20 193 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 DENND2CQ68D51 928 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 LIPIQ6XZB0 460 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 PRR23BQ6ZRT6 265 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ARMCX6Q7L4S7 300 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 PCGF5Q86SE9 256 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 TRIM69Q86WT6 500 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 SLC41A1Q8IVJ1 513 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 PPIL6Q8IXY8 311 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 DNAAF3Q8N9W5 541 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 BLOC1S5Q8TDH9 187 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 SNX19Q92543 992 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ATOH1Q92858 354 aaPredicted RBP14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 HSPA12BQ96MM6 686 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 LYSMD1Q96S90 227 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 SRPK1Q96SB4 655 aaKnown RBP14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ERP44Q9BS26 406 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 IRF2BPLQ9H1B7 796 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 DUSP15Q9H1R2 295 aaPredicted RBP14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 KCNH6Q9H252 994 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 SHOC2Q9UQ13 582 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 COQ6Q9Y2Z9 468 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 SNX24Q9Y343 169 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZNF711Q9Y462 761 aa14.11□□□□□ -0.15
APOBEC3B-202ENST00000335760 GOLGA8CPA6NN73 597 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 MEI4A8MW99 385 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 C10orf142B7Z368 130 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 LZTS3O60299 673 aaPredicted RBP14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 TM7SF2O76062 418 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 RHOBTB1O94844 696 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 CLDN7O95471 211 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 SLC4A1P02730 911 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 IGHV4-34P06331 123 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 C6P13671 934 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 IVDP26440 423 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 RPL21P46778 160 aaKnown RBP14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 SLC7A5Q01650 507 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 CDH17Q12864 832 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 CDKN3Q16667 212 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 TMEM259Q4ZIN3 620 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 RNASEH2BQ5TBB1 312 aaKnown RBP14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 LYSMD3Q7Z3D4 306 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 NAT8LQ8N9F0 302 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 FOXJ1Q92949 421 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 BIRC7Q96CA5 298 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 SNF8Q96H20 258 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZC3H10Q96K80 434 aaKnown RBP14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 SLC17A9Q9BYT1 436 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 GPR63Q9BZJ6 419 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 RAB17Q9H0T7 212 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 DPH5Q9H2P9 285 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 CASS4Q9NQ75 786 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 UTP11Q9Y3A2 253 aaKnown RBP14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 THADAQ6YHU6 1953 aa14.1□□□□□ -0.15
APOBEC3B-202ENST00000335760 GOLGA8MH3BSY2 632 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 AURKAO14965 403 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 SLC31A1O15431 190 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 TMEM63AO94886 807 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 PAK4O96013 591 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 C1SP09871 688 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZNF30P17039 623 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 PTGER3P43115 390 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 DHPSP49366 369 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 SARNPP82979 210 aaKnown RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 PTSQ03393 145 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 SGCGQ13326 291 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 MSLNQ13421 630 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 FGL2Q14314 439 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ACOX1Q15067 660 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 LPAL2Q16609 132 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 SPDYCQ5MJ68 293 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 DUPD1Q68J44 220 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 LRRC8BQ6P9F7 803 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 HSD11B1LQ7Z5J1 315 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 MCUQ8NE86 351 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 HINFPQ9BQA5 517 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 C1QTNF2Q9BXJ5 285 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 TRABDQ9H4I3 376 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 HACD3Q9P035 362 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 HCN4Q9Y3Q4 1203 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 FANCMQ8IYD8 2048 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ABCA7Q8IZY2 2146 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 LRRK1Q38SD2 2015 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 WDFY4Q6ZS81 3184 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 PSMD11O00231 422 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 LATO43561 262 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms