RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TULP3O75386 442 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM63AO94886 807 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRAMEF1O95521 474 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ASMTLO95671 621 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CTSHP09668 335 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CCNYL3P0C7X3 344 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IDEP14735 1019 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TIMP2P16035 220 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IFNAR1P17181 557 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CD1CP29017 333 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TKTP29401 623 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 DRD3P35462 400 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CLCN1P35523 988 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ADCY8P40145 1251 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MAP2K3P46734 347 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 GATMP50440 423 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 METAP2P50579 478 aaKnown RBP eCLIP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IRF9Q00978 393 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MYO1EQ12965 1108 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 LBRQ14739 615 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CST6Q15828 149 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CTXN3Q4LDR2 81 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BRMS1LQ5PSV4 323 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 HECTD3Q5T447 861 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ARL6IP4Q66PJ3 421 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 KIAA0930Q6ICG6 404 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 BHLHA9Q7RTU4 235 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CCNJLQ8IV13 435 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 C1orf174Q8IYL3 243 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NUP93Q8N1F7 819 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZADH2Q8N4Q0 377 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ARHGEF39Q8N4T4 335 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF611Q8N823 705 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 IGSF22Q8N9C0 903 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 DCAF4L2Q8NA75 395 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 LRRN4CLQ8ND94 238 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 WIPF2Q8TF74 440 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 UCN3Q969E3 161 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 NT5C3BQ969T7 300 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SDCCAG3Q96C92 435 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 KLHDC7BQ96G42 594 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 HHIPQ96QV1 700 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 UNKQ9C0B0 810 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRDM14Q9GZV8 571 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ABCG4Q9H172 646 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 RPF1Q9H9Y2 349 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 C6orf50Q9HD87 102 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ACKR4Q9NPB9 350 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ARHGEF4Q9NR80 690 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ABCB8Q9NUT2 735 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SEPT11Q9NVA2 429 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF212Q9UDV6 495 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FEZ2Q9UHY8 353 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 RIMKLBQ9ULI2 386 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MRPS2Q9Y399 296 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 PRRC2BQ5JSZ5 2229 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 FLNAP21333 2647 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 YLPM1P49750 1951 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 C7orf72A4D263 438 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MBD3L4A6NDZ8 208 aaPredicted RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MBD3L3A6NE82 208 aaPredicted RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MBD3L5A6NJ08 208 aaPredicted RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MYO1GB0I1T2 1018 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TIMM23O14925 209 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 CUTAO60888 179 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 ADAM11O75078 769 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 SLCO2B1O94956 709 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TNFSF15O95150 251 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MPOP05164 745 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 FAM157BP0CG42 384 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TSHRP16473 764 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 CFPP27918 469 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 HTR1EP28566 365 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 OR1D2P34982 312 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 SLC12A3P55017 1021 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 NLRP11P59045 1033 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 SSRP1Q08945 709 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 DNASE1L3Q13609 305 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 SPIDRQ14159 915 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM132DQ14C87 1099 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TLR1Q15399 786 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 CLUL1Q15846 466 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 PRAMEF14Q5SWL7 426 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 FAM171A1Q5VUB5 890 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 PRAMEF13Q5VWM6 474 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TDRD10Q5VZ19 366 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 TLDC1Q6P9B6 456 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 SHQ1Q6PI26 577 aaKnown RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 POMZP3Q6PJE2 187 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 FAM198BQ6UWH4 519 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 ABRAXAS1Q6UWZ7 409 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MFSD6Q6ZSS7 791 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 CATSPER4Q7RTX7 472 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 GPRIN1Q7Z2K8 1008 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 CDR2LQ86X02 465 aaPredicted RBP1.56□□□□□ -2.16
LINC00643-201ENST00000334389 CACNA2D3Q8IZS8 1091 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 FUKQ8N0W3 1084 aa1.56□□□□□ -2.16
LINC00643-201ENST00000334389 MMP21Q8N119 569 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms